RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 TEX13DA0A0J9YY54 714 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 TRBV11-1A0A0K0K1C0 115 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 CPED1A4D0V7 1026 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 C2orf78A6NCI8 922 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 DDX39AO00148 427 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 RFXANKO14593 260 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF749O43361 778 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 MFSD11O43934 449 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ADAP1O75689 374 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 CD74P04233 296 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 GJB1P08034 283 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 SOD3P08294 240 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 FOSL2P15408 326 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 CD1DP15813 335 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 HOXB9P17482 250 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 PSMB6P28072 239 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 RPS10P46783 165 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 CDC34P49427 236 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 TTPAP49638 278 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 DVL1P1P54792 670 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 TPI1P60174 286 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ARF6P62330 175 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 HEPACAMQ14CZ8 416 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 MFSD14BQ5SR56 506 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 FAM219BQ5XKK7 198 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 GGNBP1Q5YKI7 109 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 SFRP4Q6FHJ7 346 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 WDR88Q6ZMY6 472 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 Q6ZSR9 355 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 NDUFAF7Q7L592 441 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 GPRIN1Q7Z2K8 1008 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 PXKQ7Z7A4 578 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 OR10R2Q8NGX6 335 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 OR8U1Q8NH10 309 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF671Q8TAW3 534 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 FAM151AQ8WW52 585 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 SORCS1Q8WY21 1168 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 PIGBQ92521 554 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 DTD2Q96FN9 168 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 YPEL4Q96NS1 127 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 OR52E6Q96RD3 313 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 SMOQ99835 787 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 DPY30Q9C005 99 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 WDR13Q9H1Z4 485 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 CLMPQ9H6B4 373 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 TMEM231Q9H6L2 316 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 CWH43Q9H720 699 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 FN3KRPQ9HA64 309 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 MSL2Q9HCI7 577 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 POT1Q9NUX5 634 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 SPG21Q9NZD8 308 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 DNAJC27Q9NZQ0 273 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 TESQ9UGI8 421 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ST3GAL5Q9UNP4 418 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 DSPPQ9NZW4 1301 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 A0A087WZY1 265 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 TRAV14DV4A0A0A6YYC5 116 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 CBY3A6NI87 242 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 E7EQ34 232 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 MASP2O00187 686 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 GOSR2O14653 212 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 PLRG1O43660 514 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 NUDT21O43809 227 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 CLDN11O75508 207 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 CYB5R3P00387 301 aaPredicted RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 CSTAP01040 98 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 JCHAINP01591 159 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 IL6RP08887 468 aaPredicted RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 MALP21145 153 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HSD11B1P28845 292 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 CEACAM8P31997 349 aaPredicted RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 SULT1A1P50225 295 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 MVDP53602 400 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 DLX2Q07687 328 aaPredicted RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 SRSF4Q08170 494 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 RAB40BQ12829 278 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 OLIG2Q13516 323 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HERPUD1Q15011 391 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 UBE2V2Q15819 145 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 VWA2Q5GFL6 755 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 C12orf73Q69YU5 71 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 FBXO42Q6P3S6 717 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 PAQR6Q6TCH4 344 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC30A8Q8IWU4 369 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 FBXO16Q8IX29 292 aaPredicted RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 FBXO39Q8N4B4 442 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 OR2V1Q8NHB1 315 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 EDAQ92838 391 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 EXT2Q93063 718 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 ISOC2Q96AB3 205 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 CPNE2Q96FN4 548 aaPredicted RBP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 IL4I1Q96RQ9 567 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 ATOH8Q96SQ7 321 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 SULT4A1Q9BR01 284 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 PCBD2Q9H0N5 130 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 RLIMQ9NVW2 624 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 HAO2Q9NYQ3 351 aa4.66□□□□□ -1.66
TMEM39A-206ENST00000473684 LPAR3Q9UBY5 353 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 441.8 ms