RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 FAM173AQ9BQD7 235 aa2.15□□□□□ -2.07
XRN1-210ENST00000472697 MAP1LC3CQ9BXW4 147 aa2.15□□□□□ -2.07
XRN1-210ENST00000472697 LZTFL1Q9NQ48 299 aa2.15□□□□□ -2.07
XRN1-210ENST00000472697 DYRK4Q9NR20 520 aa2.15□□□□□ -2.07
XRN1-210ENST00000472697 STX18Q9P2W9 335 aaKnown RBP2.15□□□□□ -2.07
XRN1-210ENST00000472697 ASIC3Q9UHC3 531 aa2.15□□□□□ -2.07
XRN1-210ENST00000472697 CYTH4Q9UIA0 394 aa2.15□□□□□ -2.07
XRN1-210ENST00000472697 PEX16Q9Y5Y5 336 aa2.15□□□□□ -2.07
XRN1-210ENST00000472697 GMEB1Q9Y692 573 aa2.15□□□□□ -2.07
XRN1-210ENST00000472697 SELENOKQ9Y6D0 94 aa2.15□□□□□ -2.07
XRN1-210ENST00000472697 CEP290O15078 2479 aa2.15□□□□□ -2.07
XRN1-210ENST00000472697 HCFC1P51610 2035 aa2.15□□□□□ -2.07
XRN1-210ENST00000472697 LOC100131303A0A0U1RQF7 123 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 C1QTNF3-AMACRE9PGA6 284 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 NPIPA7E9PJI5 369 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 C11orf98E9PRG8 122 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 SOCS2O14508 198 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 CDX4O14627 284 aaPredicted RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 INPP4BO15327 924 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 FRAT2O75474 233 aaPredicted RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 SCGNO76038 276 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 CRYAAP02489 173 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 ATP1A1P05023 1023 aaKnown RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 HCKP08631 526 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 H2BFMP0C1H6 154 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 NPIPA8P0DM63 369 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 PRKAR1AP10644 381 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 MYL2P10916 166 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 HLA-GP17693 338 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 TCN1P20061 433 aaPredicted RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 ATP6V1B2P21281 511 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 YWHABP31946 246 aaKnown RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 NR4A2P43354 598 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 MAGEA6P43360 314 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 ALDH3B2P48448 385 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 CDC34P49427 236 aaPredicted RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 MFAP2P55001 183 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 YWHAEP62258 255 aaKnown RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 FKBP1AP62942 108 aaKnown RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 LRRC63Q05C16 580 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 IZUMO4Q1ZYL8 232 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 HSP90B2PQ58FF3 399 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 LEMD1Q68G75 181 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 C6orf89Q6UWU4 347 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 SLC25A48Q6ZT89 311 aaKnown RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 MTURNQ8N3F0 131 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 OR5AR1Q8NGP9 310 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 SPATA3Q8NHX4 192 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 LYPD6BQ8NI32 183 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 ISOC2Q96AB3 205 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 CCDC126Q96EE4 140 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 C7orf34Q96L11 122 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 APOL2Q9BQE5 337 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 TMEM59Q9BXS4 323 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 PANK2Q9BZ23 570 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 SLITRK2Q9H156 845 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 CAB39LQ9H9S4 337 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 RSPH14Q9UHP6 348 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 RCL1Q9Y2P8 373 aaKnown RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 MRPS28Q9Y2Q9 187 aaKnown RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 YARS2Q9Y2Z4 477 aaKnown RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 PPIL1Q9Y3C6 166 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 ZNF462Q96JM2 2506 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 TDRD6O60522 2096 aaKnown RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 IGHV2-70DA0A0C4DH43 119 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 TRBV11-1A0A0K0K1C0 115 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 PCP4L1A6NKN8 68 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 LRRIQ3A6PVS8 624 aaPredicted RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 TCP10L2B9ZVM9 353 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 F6UB75 175 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 GOLGA8RI6L899 631 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 K7EQD1 137 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 SNAP91O60641 907 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 NIPSNAP2O75323 286 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 KLHL2O95198 593 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 AP2A1O95782 977 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 GP1BAP07359 652 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 STSP08842 583 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 PRSS56P0CW18 603 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 HSMCR30P0CW71 290 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 PSMC3P17980 439 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 MAGP20916 626 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 MAP3K8P41279 467 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 RAD51Q06609 339 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 CYLC2Q14093 348 aaPredicted RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 TRAM2Q15035 370 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 ANGPT1Q15389 498 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 CCDC6Q16204 474 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 MS4A18Q3C1V0 323 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 FHL5Q5TD97 284 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 APOBEC3HQ6NTF7 200 aaKnown RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 TRIM40Q6P9F5 258 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 PIM3Q86V86 326 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 OR10A7Q8NGE5 316 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 OR5AP2Q8NGF4 316 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 OR10V1Q8NGI7 309 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 MPLKIPQ8TAP9 179 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 CRYGNQ8WXF5 182 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 RPL36ALQ969Q0 106 aaKnown RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 TGS1Q96RS0 853 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms