RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 ZNF92Q03936 586 aa3.21□□□□□ -1.9
CLK1-209ENST00000472679 PON3Q15166 354 aa3.21□□□□□ -1.9
CLK1-209ENST00000472679 IMMTQ16891 758 aaKnown RBP3.21□□□□□ -1.9
CLK1-209ENST00000472679 C6orf226Q5I0X4 101 aa3.21□□□□□ -1.9
CLK1-209ENST00000472679 LRRC74BQ6ZQY2 392 aa3.21□□□□□ -1.9
CLK1-209ENST00000472679 SLC25A48Q6ZT89 311 aaKnown RBP3.21□□□□□ -1.9
CLK1-209ENST00000472679 STRADAQ7RTN6 431 aa3.21□□□□□ -1.9
CLK1-209ENST00000472679 MREGQ8N565 214 aa3.21□□□□□ -1.9
CLK1-209ENST00000472679 C15orf56Q8N910 161 aa3.21□□□□□ -1.9
CLK1-209ENST00000472679 HSD17B11Q8NBQ5 300 aa3.21□□□□□ -1.9
CLK1-209ENST00000472679 UBALD1Q8TB05 177 aa3.21□□□□□ -1.9
CLK1-209ENST00000472679 LRRC40Q9H9A6 602 aa3.21□□□□□ -1.9
CLK1-209ENST00000472679 ZNF629Q9UEG4 869 aaPredicted RBP3.21□□□□□ -1.9
CLK1-209ENST00000472679 CTNNA3Q9UI47 895 aa3.21□□□□□ -1.9
CLK1-209ENST00000472679 KIAA1257Q9ULG3 409 aa3.21□□□□□ -1.9
CLK1-209ENST00000472679 HIDE1A8MVS5 230 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 CXCL11O14625 94 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 CTDNEP1O95476 244 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 C2P06681 752 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 PRPS2P11908 318 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 EPS15P42566 896 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 ACTA2P62736 377 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 ACTC1P68032 377 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 LY6G6FQ5SQ64 297 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 FAM92BQ6ZTR7 304 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 IFT74Q96LB3 600 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 OR2A5Q96R48 311 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 SH3GL1Q99961 368 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 SLC39A3Q9BRY0 314 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 CHAC1Q9BUX1 264 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 ZNF430Q9H8G1 570 aaPredicted RBP3.2□□□□□ -1.9
CLK1-209ENST00000472679 NT5MQ9NPB1 228 aa3.2□□□□□ -1.9
CLK1-209ENST00000472679 YTHDF2Q9Y5A9 579 aaKnown RBP3.2□□□□□ -1.9
CLK1-209ENST00000472679 IGHV3-66A0A0C4DH42 116 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 A0A1B0GVX0 72 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 INS-IGF2F8WCM5 200 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 GOSR2O14653 212 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 TMEM50AO95807 157 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 C6orf47O95873 294 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 MRPL3P09001 348 aaKnown RBP3.19□□□□□ -1.9
CLK1-209ENST00000472679 FOLR1P15328 257 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 PGAM1P18669 254 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 SSR1P43307 286 aaKnown RBP3.19□□□□□ -1.9
CLK1-209ENST00000472679 TPMTP51580 245 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 UGT2B15P54855 530 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 ARHGAP19Q14CB8 494 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 ZNF493Q6ZR52 646 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 C19orf35Q6ZS72 473 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 ASCL5Q7RTU5 278 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 PGAM4Q8N0Y7 254 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 CEP112Q8N8E3 955 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 OR2L8Q8NGY9 312 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 ZBTB18Q99592 522 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 KCTD14Q9BQ13 255 aaPredicted RBP3.19□□□□□ -1.9
CLK1-209ENST00000472679 SCRT1Q9BWW7 348 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 HYPKQ9NX55 129 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 OR12D3Q9UGF7 316 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 OPN4Q9UHM6 478 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 ZNF222Q9UK12 451 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 CENPJQ9HC77 1338 aaPredicted RBP3.19□□□□□ -1.9
CLK1-209ENST00000472679 IGSF9BQ9UPX0 1349 aa3.19□□□□□ -1.9
CLK1-209ENST00000472679 IGKV6-21A0A0C4DH24 114 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 IGHV5-51A0A0C4DH38 117 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 ARHGEF35A5YM69 484 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 PSTPIP1O43586 416 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 EIF3GO75821 320 aaKnown RBP eCLIP3.18□□□□□ -1.9
CLK1-209ENST00000472679 UTS2O95399 124 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 CT62P0C5K7 136 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 KITLGP21583 273 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 AK4P27144 223 aaPredicted RBP3.18□□□□□ -1.9
CLK1-209ENST00000472679 CDH4P55283 916 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 POU2AF1Q16633 256 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 PHYHD1Q5SRE7 291 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 HES5Q5TA89 166 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 PP632Q6XCG6 107 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 TGIF2LXQ8IUE1 241 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 TTC5Q8N0Z6 440 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 OR2L3Q8NG85 312 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 OR5W2Q8NH69 310 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 TCHPQ9BT92 498 aa3.18□□□□□ -1.9
CLK1-209ENST00000472679 RSPO3Q9BXY4 272 aaPredicted RBP3.18□□□□□ -1.9
CLK1-209ENST00000472679 MRPL37Q9BZE1 423 aaKnown RBP3.18□□□□□ -1.9
CLK1-209ENST00000472679 RPF2Q9H7B2 306 aaKnown RBP3.18□□□□□ -1.9
CLK1-209ENST00000472679 MRPS18BQ9Y676 258 aaKnown RBP3.18□□□□□ -1.9
CLK1-209ENST00000472679 PCM1Q15154 2024 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 A0A1W2PQ67 120 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 RHOXF2BP0C7M4 288 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 SERPINB5P36952 375 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 CYB561P49447 251 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 STK11Q15831 433 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 UBE2SQ16763 222 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 CTSL3PQ5NE16 218 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 DUX4L9Q6RFH8 374 aaPredicted RBP3.17□□□□□ -1.9
CLK1-209ENST00000472679 ARL6IP6Q8N6S5 226 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 OR10G4Q8NGN3 311 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 FRZBQ92765 325 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 SH3GL3Q99963 347 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 NDFIP1Q9BT67 221 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 LINC00597Q9H2U6 94 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 SUN2Q9UH99 717 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms