RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 POFUT2Q9Y2G5 429 aa7.9□□□□□ -1.14
VCL-204ENST00000472585 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.9□□□□□ -1.14
VCL-204ENST00000472585 A0A1B0GUS0 222 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 A0A1W2PPW3 197 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 TRAPPC2LH3BP13 241 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 RFXANKO14593 260 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 OR2T1O43869 369 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 KRT75O95678 551 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 ZCCHC18P0CG32 403 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 MAKP20794 623 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 EPHA3P29320 983 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 RAD52P43351 418 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 LCN2P80188 198 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 TSTQ16762 297 aaKnown RBP7.89□□□□□ -1.15
VCL-204ENST00000472585 NKPD1Q17RQ9 610 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 RGS7BPQ6MZT1 257 aaPredicted RBP7.89□□□□□ -1.15
VCL-204ENST00000472585 USP51Q70EK9 711 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 NET1Q7Z628 596 aaPredicted RBP7.89□□□□□ -1.15
VCL-204ENST00000472585 C1QL4Q86Z23 238 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 SLC22A24Q8N4F4 322 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 SLC38A4Q969I6 547 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 TMIGD2Q96BF3 282 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 ULBP2Q9BZM5 246 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 C12orf10Q9HB07 376 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 NKIRAS2Q9NYR9 191 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 PDP1Q9P0J1 537 aaPredicted RBP7.89□□□□□ -1.15
VCL-204ENST00000472585 TESQ9UGI8 421 aaKnown RBP7.89□□□□□ -1.15
VCL-204ENST00000472585 SLC7A8Q9UHI5 535 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 LEF1Q9UJU2 399 aaPredicted RBP7.89□□□□□ -1.15
VCL-204ENST00000472585 NUP50Q9UKX7 468 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 ZNF232Q9UNY5 417 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 IFT52Q9Y366 437 aa7.89□□□□□ -1.15
VCL-204ENST00000472585 IGHV1-69-2A0A0G2JMI3 117 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 BIRC5O15392 142 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 SERPINI2O75830 405 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 UBOX5O94941 541 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 LYPD3O95274 346 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 RAB36O95755 333 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 THY1P04216 161 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 NQO1P15559 274 aaKnown RBP7.88□□□□□ -1.15
VCL-204ENST00000472585 OMGP23515 440 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 GTF2E2P29084 291 aaKnown RBP7.88□□□□□ -1.15
VCL-204ENST00000472585 ANXA11P50995 505 aaKnown RBP7.88□□□□□ -1.15
VCL-204ENST00000472585 BIDP55957 195 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 SEC61A1P61619 476 aaKnown RBP7.88□□□□□ -1.15
VCL-204ENST00000472585 RPS23P62266 143 aaKnown RBP7.88□□□□□ -1.15
VCL-204ENST00000472585 GALK2Q01415 458 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 GLO1Q04760 184 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 BST1Q10588 318 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 RGNQ15493 299 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 ALG10BQ5I7T1 473 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 LINC00114Q6XXX2 140 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 SPATC1Q76KD6 591 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 PIWIL3Q7Z3Z3 882 aaKnown RBP7.88□□□□□ -1.15
VCL-204ENST00000472585 MAVSQ7Z434 540 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 TSPYL5Q86VY4 417 aaPredicted RBP7.88□□□□□ -1.15
VCL-204ENST00000472585 JAZF1Q86VZ6 243 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 MSRB3Q8IXL7 192 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 MIER2Q8N344 545 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 CPEB3Q8NE35 698 aaKnown RBP7.88□□□□□ -1.15
VCL-204ENST00000472585 SLC30A7Q8NEW0 376 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 OR9I1Q8NGQ6 314 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 OR6N1Q8NGY5 312 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 SYNPRQ8TBG9 265 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 GTF2H4Q92759 462 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 POP5Q969H6 163 aaKnown RBP7.88□□□□□ -1.15
VCL-204ENST00000472585 SLC35B4Q969S0 331 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 PAIP1Q9H074 479 aaKnown RBP7.88□□□□□ -1.15
VCL-204ENST00000472585 DENND2DQ9H6A0 471 aaPredicted RBP7.88□□□□□ -1.15
VCL-204ENST00000472585 BEX1Q9HBH7 125 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 NPHS2Q9NP85 383 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 MRPL39Q9NYK5 338 aaKnown RBP7.88□□□□□ -1.15
VCL-204ENST00000472585 TAS2R5Q9NYW4 299 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 SLC25A37Q9NYZ2 338 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 CALML5Q9NZT1 146 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 SLAMF8Q9P0V8 285 aa7.88□□□□□ -1.15
VCL-204ENST00000472585 ZNF346Q9UL40 294 aaKnown RBP7.88□□□□□ -1.15
VCL-204ENST00000472585 A0A0B4J2E0 115 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 A0A1B0GX12 115 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 ZNF726A6NNF4 738 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 C11orf98E9PRG8 122 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 UBL3O95164 117 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 IGHV1-46P01743 117 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 IGHV3-13P01766 116 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 CRYBA1P05813 215 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 LCKP06239 509 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 MMP7P09237 267 aaPredicted RBP7.87□□□□□ -1.15
VCL-204ENST00000472585 OR8G3PP0DMU2 310 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 MPV17P39210 176 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 WNT5AP41221 380 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 CSNK1A1P48729 337 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 ATP4BP51164 291 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 MMP15P51511 669 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 CDH12P55289 794 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 UCP2P55851 309 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 KLF3P57682 345 aaPredicted RBP7.87□□□□□ -1.15
VCL-204ENST00000472585 TEKQ02763 1124 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 PUDPQ08623 228 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 PMS2P3Q13401 168 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 OR1Q1Q15612 314 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms