RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 OR1J2Q8NGS2 313 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 MIPOL1Q8TD10 442 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 STK35Q8TDR2 534 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 IPCEF1Q8WWN9 437 aaPredicted RBP5.79□□□□□ -1.48
HDAC1-204ENST00000471488 SLC38A4Q969I6 547 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 TAAR8Q969N4 342 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF75AQ96N20 296 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 TRNT1Q96Q11 434 aaKnown RBP5.79□□□□□ -1.48
HDAC1-204ENST00000471488 MECRQ9BV79 373 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 PTDSS2Q9BVG9 487 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 FUT8Q9BYC5 575 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 BCL2L14Q9BZR8 327 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 ARMC7Q9H6L4 198 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 PATZ1Q9HBE1 687 aaKnown RBP5.79□□□□□ -1.48
HDAC1-204ENST00000471488 TMEM106BQ9NUM4 274 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF224Q9NZL3 707 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 SELENONQ9NZV5 590 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 KIF17Q9P2E2 1029 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 B3GAT1Q9P2W7 334 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 EIF3KQ9UBQ5 218 aaKnown RBP5.79□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF232Q9UNY5 417 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF443Q9Y2A4 671 aaPredicted RBP5.79□□□□□ -1.48
HDAC1-204ENST00000471488 WNK1Q9H4A3 2382 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 KMT2CQ8NEZ4 4911 aaKnown RBP5.78□□□□□ -1.48
HDAC1-204ENST00000471488 IGLV3-9A0A075B6K5 115 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 PPIAL4EA0A075B759 164 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 PPIAL4CA0A0B4J2A2 164 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 IGHV3-64DA0A0J9YX35 117 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 PRSS51A0A1B0GVH4 220 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 C5orf49A4QMS7 147 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 CDHR4A6H8M9 788 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 ZSCAN5BA6NJL1 495 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 FTCDNL1E5RQL4 147 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 PPIAL4DF5H284 164 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 FAAHO00519 579 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 RNASET2O00584 256 aaKnown RBP5.78□□□□□ -1.48
HDAC1-204ENST00000471488 OR2T1O43869 369 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 TRIM13O60858 407 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 NDUFA7O95182 113 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 OR6A2O95222 327 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 HPRP00739 348 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 PTHP01270 115 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 IGHV2-70P01814 119 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 PPIAL4FP0DN26 164 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 TNFSF4P23510 183 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 CRATP43155 626 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 SLC6A9P48067 706 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 CLDN8P56748 225 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 FGF12P61328 243 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 BTG1P62324 171 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 CKAP4Q07065 602 aaKnown RBP5.78□□□□□ -1.48
HDAC1-204ENST00000471488 DBPQ10586 325 aaPredicted RBP5.78□□□□□ -1.48
HDAC1-204ENST00000471488 MAD2L1Q13257 205 aaPredicted RBP5.78□□□□□ -1.48
HDAC1-204ENST00000471488 MELKQ14680 651 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 ZMYND11Q15326 602 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 SLC36A2Q495M3 483 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 DEFB121Q5J5C9 76 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 FAM209AQ5JX71 171 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 COX20Q5RI15 118 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 FAM69AQ5T7M9 428 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 ANXA8L1Q5VT79 327 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 C11orf87Q6NUJ2 197 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 LRRN1Q6UXK5 716 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 LRRC74BQ6ZQY2 392 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 PIWIL3Q7Z3Z3 882 aaKnown RBP5.78□□□□□ -1.48
HDAC1-204ENST00000471488 PDZD9Q8IXQ8 264 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 CLIP4Q8N3C7 705 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 TRIML2Q8N7C3 387 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 SCCPDHQ8NBX0 429 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 RBM15BQ8NDT2 890 aaKnown RBP5.78□□□□□ -1.48
HDAC1-204ENST00000471488 OR2Z1Q8NG97 314 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 LINC01006Q8NI28 216 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 ABHD4Q8TB40 342 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 TBC1D15Q8TC07 691 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 OIT3Q8WWZ8 545 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 ITPKCQ96DU7 683 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 PANX1Q96RD7 426 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 SSBP3Q9BWW4 388 aaPredicted RBP5.78□□□□□ -1.48
HDAC1-204ENST00000471488 OR2J1Q9GZK6 312 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 KCNN2Q9H2S1 579 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 DENND2DQ9H6A0 471 aaPredicted RBP5.78□□□□□ -1.48
HDAC1-204ENST00000471488 CCNB1IP1Q9NPC3 277 aa5.78□□□□□ -1.48
HDAC1-204ENST00000471488 NOP53Q9NZM5 478 aaKnown RBP5.78□□□□□ -1.48
HDAC1-204ENST00000471488 RYR3Q15413 4870 aa5.77□□□□□ -1.48
HDAC1-204ENST00000471488 TRAV36DV7A0A075B6V5 113 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 IGHV2-70DA0A0C4DH43 119 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 TMEM247A6NEH6 219 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 CCDC154A6NI56 674 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 LRRN3E7EW58 273 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 MS4A18H0YCH9 400 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 TM9SF1O15321 606 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 GPR137BO60478 399 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 NPIPB7O75200 414 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 ENTPD5O75356 428 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 ANP32DO95626 131 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 MPIG6BO95866 241 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 IGHV3-13P01766 116 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 IGHV4-59P01825 116 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 MELTFP08582 738 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 ADORA3P0DMS8 318 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms