RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TP63Q9H3D4 680 aaPredicted RBP8.71□□□□□ -1.02
SF3A1-207ENST00000471342 KRCC1Q9NPI7 259 aaPredicted RBP8.71□□□□□ -1.02
SF3A1-207ENST00000471342 B9D1Q9UPM9 204 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 GMPPBQ9Y5P6 360 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 ZGRF1Q86YA3 2104 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 FREM1Q5H8C1 2179 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 NCOA6Q14686 2063 aaPredicted RBP8.7□□□□□ -1.02
SF3A1-207ENST00000471342 SERPINI2O75830 405 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 HIST1H2ABP04908 130 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 HMGN1P05114 100 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 GYPBP06028 91 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 ZNF43P17038 809 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 SPI1P17947 270 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 IGHV1-2P23083 117 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 CCKARP32238 428 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 RPL4P36578 427 aaKnown RBP8.7□□□□□ -1.02
SF3A1-207ENST00000471342 IL1RL1Q01638 556 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 TEKQ02763 1124 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 TFF3Q07654 80 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 PMPCAQ10713 525 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 KCNMB1Q16558 191 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 EIF2S3LQ2VIR3 472 aaKnown RBP8.7□□□□□ -1.02
SF3A1-207ENST00000471342 C6orf141Q5SZD1 244 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 ZNF684Q5T5D7 378 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 NIPAL3Q6P499 406 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 PLBD1Q6P4A8 553 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 HIST3H2AQ7L7L0 130 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 ZNF610Q8N9Z0 462 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 SYT14Q8NB59 555 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 ZNF485Q8NCK3 441 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 OR10S1Q8NGN2 331 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 OR8J1Q8NGP2 316 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 OR9Q1Q8NGQ5 310 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 FAM81AQ8TBF8 368 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 TEX47Q8TBZ9 253 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 SMAP2Q8WU79 429 aaPredicted RBP8.7□□□□□ -1.02
SF3A1-207ENST00000471342 HIST1H2ACQ93077 130 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 DOCK7Q96N67 2140 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 TEAD3Q99594 435 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 ALG12Q9BV10 488 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 DUSP21Q9H596 190 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 NOX3Q9HBY0 568 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 TIGARQ9NQ88 270 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 GLRX2Q9NS18 164 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 RASSF1Q9NS23 344 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 PLCXD1Q9NUJ7 323 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 HAO2Q9NYQ3 351 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 GLTPQ9NZD2 209 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 KIF17Q9P2E2 1029 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 KLHL9Q9P2J3 617 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 MALT1Q9UDY8 824 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 MCTS1Q9ULC4 181 aaKnown RBP8.7□□□□□ -1.02
SF3A1-207ENST00000471342 OSGIN2Q9Y236 505 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 HSPE1-MOB4S4R3N1 261 aa8.7□□□□□ -1.02
SF3A1-207ENST00000471342 HIVEP3Q5T1R4 2406 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 TRIM64CA6NLI5 447 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 FAM171A2A8MVW0 826 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 A8MXE2 369 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 ARHGEF9O43307 516 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 AHCYL1O43865 530 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 SYNGR4O95473 234 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 IGHV3-9P01782 118 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 CRHP06850 196 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 QDPRP09417 244 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 CD8BP10966 210 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 ABOP16442 354 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 COX5AP20674 150 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 GSTT1P30711 240 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 FMO3P31513 532 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 CDAP32320 146 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 PYCR1P32322 319 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 DAP3P51398 398 aaKnown RBP8.69□□□□□ -1.02
SF3A1-207ENST00000471342 HIST1H3AP68431 136 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 ENDOGQ14249 297 aaKnown RBP8.69□□□□□ -1.02
SF3A1-207ENST00000471342 GGTLC2Q14390 218 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 IRF3Q14653 427 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 SNAPC1Q16533 368 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 HIST2H3PS2Q5TEC6 136 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 NXNL2Q5VZ03 156 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 LEG1Q6P5S2 330 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 HIST2H3AQ71DI3 136 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 AAED1Q7RTV5 226 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 THAP5Q7Z6K1 395 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 ADCK1Q86TW2 530 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 RFLNBQ8N5W9 214 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 WDR31Q8NA23 367 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 ZNF511Q8NB15 262 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 SLC26A10Q8NG04 563 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 OR51L1Q8NGJ5 315 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 OR6K3Q8NGY3 331 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 GGHQ92820 318 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 ZNF566Q969W8 418 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 SDCCAG3Q96C92 435 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 CCDC120Q96HB5 630 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 ADAD1Q96M93 576 aaKnown RBP8.69□□□□□ -1.02
SF3A1-207ENST00000471342 AMELYQ99218 206 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 TM9SF2Q99805 663 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 RACGAP1Q9H0H5 632 aa8.69□□□□□ -1.02
SF3A1-207ENST00000471342 OPN3Q9H1Y3 402 aaPredicted RBP8.69□□□□□ -1.02
SF3A1-207ENST00000471342 ADGRL4Q9HBW9 690 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms