RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 LIMS3P0CW19 117 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 LIMS4P0CW20 117 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 IMPDH2P12268 514 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 CCNA2P20248 432 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 GSTT1P30711 240 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 SSTR2P30874 369 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 RGS6P49758 472 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 B3GALT5-AS1P59052 145 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 ERVK-25P63136 954 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 HSF1Q00613 529 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 TPBGQ13641 420 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 GALEQ14376 348 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 OR7A5Q15622 319 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 CCDC58Q4VC31 144 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 SLC35F1Q5T1Q4 408 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 GFRALQ6UXV0 394 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 NHLRC1Q6VVB1 395 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 FJX1Q86VR8 437 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 UEVLDQ8IX04 471 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 ZNF454Q8N9F8 522 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 ZNF485Q8NCK3 441 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 OR4K13Q8NH42 304 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 OR6X1Q8NH79 312 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 INTS12Q96CB8 462 aaKnown RBP8.18□□□□□ -1.1
PTPRE-207ENST00000471218 ARL5BQ96KC2 179 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 Q96M85 177 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 GNRHR2Q96P88 292 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 TSPAN32Q96QS1 320 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 RHNO1Q9BSD3 238 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 FUNDC2Q9BWH2 189 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 ADGRL4Q9HBW9 690 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 NDUFB11Q9NX14 153 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 ERVK13-1Q9NX77 482 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 KLHL13Q9P2N7 655 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 AASSQ9UDR5 926 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 IL20RAQ9UHF4 553 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 KCNG2Q9UJ96 466 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 NPIPA1Q9UND3 350 aa8.18□□□□□ -1.1
PTPRE-207ENST00000471218 OTOGQ6ZRI0 2925 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 CSMD1Q96PZ7 3565 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 C2orf72A6NCS6 295 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 OR6C68A6NDL8 312 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 CCDC160A6NGH7 325 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 C17orf51A8MQB3 221 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 H3BMQ9 156 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 H3BSA7 217 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 SULT2B1O00204 365 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 EFNA2O43921 213 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 BCL10O95999 233 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 ACTL6AO96019 429 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 IGHG1P01857 330 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 MT-ND5P03915 603 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 CPEP16870 476 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 POU3F2P20265 443 aaPredicted RBP8.17□□□□□ -1.1
PTPRE-207ENST00000471218 PTNP21246 168 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 MAP2K4P45985 399 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 DNASE1L1P49184 302 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 TNFSF10P50591 281 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 P2RY4P51582 365 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 ZNF133P52736 654 aaPredicted RBP8.17□□□□□ -1.1
PTPRE-207ENST00000471218 SLC16A1P53985 500 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 GFRA1P56159 465 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 GPR85P60893 370 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 RPS7P62081 194 aaKnown RBP8.17□□□□□ -1.1
PTPRE-207ENST00000471218 GLO1Q04760 184 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 STK11Q15831 433 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 CNPY1Q3B7I2 92 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 KLHL12Q53G59 568 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 KRTCAP3Q53RY4 240 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 MESTQ5EB52 335 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 ARMCX4Q5H9R4 360 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 TEX30Q5JUR7 227 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 THEM4Q5T1C6 240 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 LINC01590Q5TEZ4 76 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 LEG1Q6P5S2 330 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 POMZP3Q6PJE2 187 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 ZNF322Q6U7Q0 402 aaPredicted RBP8.17□□□□□ -1.1
PTPRE-207ENST00000471218 SLC35D2Q76EJ3 337 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 SLC16A9Q7RTY1 509 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 MRGPRGQ86SM5 289 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 FAM109AQ8N4B1 249 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 FAM83FQ8NEG4 500 aaPredicted RBP8.17□□□□□ -1.1
PTPRE-207ENST00000471218 SDR9C7Q8NEX9 313 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 BBS1Q8NFJ9 593 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 KBTBD8Q8NFY9 601 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 OR14L1PQ8NHC6 308 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 ASB10Q8WXI3 467 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 ASB17Q8WXJ9 295 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 THRSPQ92748 146 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 UFD1Q92890 307 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 CPNE4Q96A23 557 aaPredicted RBP8.17□□□□□ -1.1
PTPRE-207ENST00000471218 TMIGD2Q96BF3 282 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 SLC25A36Q96CQ1 311 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 RASD2Q96D21 266 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 SFXN2Q96NB2 322 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 OR5B2Q96R09 309 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 NMNAT3Q96T66 252 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 ZNF649Q9BS31 505 aa8.17□□□□□ -1.1
PTPRE-207ENST00000471218 TSPAN10Q9H1Z9 355 aaPredicted RBP8.17□□□□□ -1.1
PTPRE-207ENST00000471218 GP6Q9HCN6 339 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms