RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 RAB40AQ8WXH6 277 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 FGF11Q92914 225 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 PGLYRP3Q96LB9 341 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 CCDC74BQ96LY2 380 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 MYADMQ96S97 322 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 TMEM208Q9BTX3 173 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 HCAR1Q9BXC0 346 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 RSPO3Q9BXY4 272 aaPredicted RBP3.86□□□□□ -1.79
VPS50-210ENST00000471188 TEX101Q9BY14 249 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 P2RX2Q9UBL9 471 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 OR5V1Q9UGF6 321 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 H7C417 338 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 M0R143 59 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 DLEU1O43261 78 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 RPP14O95059 124 aaKnown RBP3.86□□□□□ -1.79
VPS50-210ENST00000471188 PPP1R3DO95685 299 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 C8GP07360 202 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 MMP7P09237 267 aaPredicted RBP3.86□□□□□ -1.79
VPS50-210ENST00000471188 OR8U9P0C7N5 309 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 AKR1C4P17516 323 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 FUT1P19526 365 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 PRSS3P35030 304 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 SLC26A5P58743 744 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 PFN3P60673 137 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 ADAM8P78325 824 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 IL13RA1P78552 427 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 LTBQ06643 244 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 RASGEF1BQ0VAM2 473 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 ST3GAL3Q11203 375 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 SLC10A1Q14973 349 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 HMGN3Q15651 99 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 VWA2Q5GFL6 755 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 SLC35D3Q5M8T2 416 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 SAPCD1Q5SSQ6 148 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 PWWP2BQ6NUJ5 590 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 ARMC6Q6NXE6 501 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 LPCAT3Q6P1A2 487 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 MED27Q6P2C8 311 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 NIPAL3Q6P499 406 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 FBXO46Q6PJ61 603 aaPredicted RBP3.86□□□□□ -1.79
VPS50-210ENST00000471188 TMPRSS11FQ6ZWK6 438 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 MTSS1LQ765P7 747 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 CD163Q86VB7 1156 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 TMEM86AQ8N2M4 240 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 GPR137CQ8N3F9 429 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 LMNTD1Q8N9Z9 388 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 OR4K14Q8NGD5 310 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 OR8U1Q8NH10 309 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 MFSD8Q8NHS3 518 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 C15orf40Q8WUR7 153 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 APOBEC4Q8WW27 367 aaKnown RBP3.86□□□□□ -1.79
VPS50-210ENST00000471188 HAVCR1Q96D42 359 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 MYEOVQ96EZ4 313 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 DTD2Q96FN9 168 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 TAAR9Q96RI9 348 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 INTS14Q96SY0 518 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 MESP1Q9BRJ9 268 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 PAAF1Q9BRP4 392 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 UTP23Q9BRU9 249 aaKnown RBP3.86□□□□□ -1.79
VPS50-210ENST00000471188 ACTRT3Q9BYD9 372 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 KATNBL1Q9H079 304 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 ASCL3Q9NQ33 180 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 ADARB2Q9NS39 739 aaKnown RBP3.86□□□□□ -1.79
VPS50-210ENST00000471188 CBLN4Q9NTU7 201 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 MARCH2Q9P0N8 246 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 MTFP1Q9UDX5 166 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 CHRNA9Q9UGM1 479 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 ZMIZ1Q9ULJ6 1067 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 NTNG1Q9Y2I2 539 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 FBXO7Q9Y3I1 522 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 TIMM10BQ9Y5J6 103 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 PDCD11Q14690 1871 aaKnown RBP3.86□□□□□ -1.79
VPS50-210ENST00000471188 ALPK2Q86TB3 2170 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 UTRNP46939 3433 aa3.86□□□□□ -1.79
VPS50-210ENST00000471188 A0A087WV62 115 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 SLC22A31A6NKX4 558 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ZNF727A8MUV8 499 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 A8MWP6 167 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 FOXE1O00358 373 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 RTCAO00442 366 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 TGOLN2O43493 480 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TCF21O43680 179 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 OR1F1O43749 312 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 CD8AP01732 235 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 RHOCP08134 193 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 OR8G3PP0DMU2 310 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 SLC25A4P12235 298 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 RNH1P13489 461 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 MYOGP15173 224 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ACRV1P26436 265 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 HSD3B2P26439 372 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 PSMB6P28072 239 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 IL2RGP31785 369 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 APLNRP35414 380 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 SLC6A12P48065 614 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 PNLIPRP1P54315 467 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 SEC13P55735 322 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 RGS8P57771 180 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 RHOAP61586 193 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 RPS24P62847 133 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms