RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 MED20Q9H944 212 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 ACSS1Q9NUB1 689 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-210ENST00000471181 SCML1Q9UN30 329 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 GPR171O14626 319 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 SSSCA1O60232 199 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 CPEP16870 476 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 TGFBR1P36897 503 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 DCTP40126 519 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 ARSDP51689 593 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 HTR4Q13639 388 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 PAFAH1B3Q15102 231 aaKnown RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 SPRYD7Q5W111 196 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 OR2AE1Q8NHA4 323 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 LILRB1Q8NHL6 650 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 TMEM163Q8TC26 289 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 RBPMSQ93062 196 aaKnown RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 SLC45A3Q96JT2 553 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 C20orf85Q9H1P6 137 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 C8orf33Q9H7E9 229 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 RFPL4AA6NLU0 287 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 RFPL4AL1F8VTS6 287 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 DNASE2O00115 360 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 ZFAND5O76080 213 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 C7P10643 843 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 C5AR1P21730 350 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 BMP5P22003 454 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 CD40P25942 277 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 GPM6AP51674 278 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 CLDN8P56748 225 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 OR2B8PP59922 312 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 ERVFC1P60507 584 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 RHOBP62745 196 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 GPLD1P80108 840 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 MFAP5Q13361 173 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 Q56UQ5 140 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 TECRLQ5HYJ1 363 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 PXDC1Q5TGL8 231 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 TBPL2Q6SJ96 375 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 TEX261Q6UWH6 196 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 Q6ZSR6 202 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 PARP16Q8N5Y8 322 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 EID2Q8N6I1 236 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 ABHD4Q8TB40 342 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 MRPS24Q96EL2 167 aaKnown RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 FAM117AQ9C073 453 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 ACTR3CQ9C0K3 210 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 OR2J1Q9GZK6 312 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 NXF2Q9GZY0 626 aaKnown RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 RNF39Q9H2S5 420 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 OR52D1Q9H346 318 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 TMEM231Q9H6L2 316 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 M0R1B8 84 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 SIRPB1O00241 398 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 FAM189A1O60320 539 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 GPR32O75388 356 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 S1PR4O95977 384 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 SOD2P04179 222 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 RAB40ALP0C0E4 278 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 NTSR1P30989 418 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 ETV6P41212 452 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 SULT1A1P50225 295 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 PPOXP50336 477 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 GPR85P60893 370 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 RAB40BQ12829 278 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 CDK5R2Q13319 367 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 SLC17A1Q14916 467 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 C11orf91Q3C1V1 193 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 ACOT6Q3I5F7 207 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF620Q6ZNG0 422 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 OSTM1Q86WC4 334 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 TGIF2LXQ8IUE1 241 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 OR6V1Q8N148 313 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 CPEB3Q8NE35 698 aaKnown RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 DEFB108BQ8NET1 73 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 CMASQ8NFW8 434 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 LGALS14Q8TCE9 139 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 ADAMTS16Q8TE57 1224 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 RAB40AQ8WXH6 277 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 CMBLQ96DG6 245 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF696Q9H7X3 374 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 CNTD2Q9H8S5 307 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 TNS2Q63HR2 1409 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 SLC5A10A0PJK1 596 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF727A8MUV8 499 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 KLF11O14901 512 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 SOX15O60248 233 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 GCGP01275 180 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 RBP4P02753 201 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 UNGP13051 313 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 GDNFP39905 211 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 CD200P41217 278 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 RGRP47804 291 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 SSR4P51571 173 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 TPMTP51580 245 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 RANP62826 216 aaKnown RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 CSNK1G2P78368 415 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 MS4A2Q01362 244 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 GTDC1Q4AE62 458 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 DGAT2L7PQ6IED9 249 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 LILRB4Q8NHJ6 448 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms