RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.93□□□□□ -1.46
VAMP3-202ENST00000470357 PXKQ7Z7A4 578 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 YRDCQ86U90 279 aaKnown RBP5.93□□□□□ -1.46
VAMP3-202ENST00000470357 MEX3DQ86XN8 651 aaKnown RBP5.93□□□□□ -1.46
VAMP3-202ENST00000470357 CCDC71Q8IV32 467 aaPredicted RBP5.93□□□□□ -1.46
VAMP3-202ENST00000470357 TMEM251Q8N6I4 163 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 IQCF1Q8N6M8 205 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 LRRC17Q8N6Y2 441 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 TCEANCQ8N8B7 351 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 ATP6V1C2Q8NEY4 427 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 TSPAN14Q8NG11 270 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 OR4Q3Q8NH05 313 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 FNDC8Q8TC99 324 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 CPNE4Q96A23 557 aaPredicted RBP5.93□□□□□ -1.46
VAMP3-202ENST00000470357 ZNF524Q96C55 264 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 ARL5BQ96KC2 179 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 OXGR1Q96P68 337 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 ERMAPQ96PL5 475 aaPredicted RBP5.93□□□□□ -1.46
VAMP3-202ENST00000470357 MYCBPQ99417 103 aaPredicted RBP5.93□□□□□ -1.46
VAMP3-202ENST00000470357 KATNB1Q9BVA0 655 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 MRPS26Q9BYN8 205 aaKnown RBP5.93□□□□□ -1.46
VAMP3-202ENST00000470357 TXNIPQ9H3M7 391 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 LDAHQ9H6V9 325 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 EXO5Q9H790 373 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 ZDHHC11Q9H8X9 412 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 RASSF1Q9NS23 344 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 ZNF226Q9NYT6 803 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 B3GNT3Q9Y2A9 372 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 PCDHGB1Q9Y5G3 927 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 SNX5Q9Y5X3 404 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 AKAP9Q99996 3911 aa5.93□□□□□ -1.46
VAMP3-202ENST00000470357 DNHD1Q96M86 4753 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 MED12Q93074 2177 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 TRGV5A0A0B4J1U4 118 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 AQP7P3A6NL99 342 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 CLCA1A8K7I4 914 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 FAM166BA8MTA8 275 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 CENPBD1B2RD01 187 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 KDM4EB2RXH2 506 aaPredicted RBP5.92□□□□□ -1.46
VAMP3-202ENST00000470357 MCIDASD6RGH6 385 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 LRRN3E7EW58 273 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 NPIPA5E9PKD4 350 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 K7EM74 188 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 EFNA2O43921 213 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 PRKYO43930 277 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 WBP4O75554 376 aaKnown RBP5.92□□□□□ -1.46
VAMP3-202ENST00000470357 PPP1R3DO95685 299 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 BCL10O95999 233 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 RENP00797 406 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 IGHG3P01860 377 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 CD3EP07766 207 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 IGFBP1P08833 259 aaPredicted RBP5.92□□□□□ -1.46
VAMP3-202ENST00000470357 RFPL3SP0C7P2 107 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 IFNGR1P15260 489 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 ZNF43P17038 809 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 IL11P20809 199 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 ENPP1P22413 925 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 TCEA1P23193 301 aaKnown RBP5.92□□□□□ -1.46
VAMP3-202ENST00000470357 AHCYP23526 432 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 MAGEA5P43359 124 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 MTNR1AP48039 350 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 MLLT10P55197 1068 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 CARD18P57730 90 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 FXYD6P3P58550 94 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 RPL27P61353 136 aaKnown RBP5.92□□□□□ -1.46
VAMP3-202ENST00000470357 EFNB1P98172 346 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 RAB40BQ12829 278 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 KRR1Q13601 381 aaKnown RBP5.92□□□□□ -1.46
VAMP3-202ENST00000470357 C1DQ13901 141 aaKnown RBP5.92□□□□□ -1.46
VAMP3-202ENST00000470357 SLC35D3Q5M8T2 416 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 C1QL3Q5VWW1 255 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 HBMQ6B0K9 141 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 VASNQ6EMK4 673 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 DNM1P34Q6PK57 102 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 CXXC5Q7LFL8 322 aaKnown RBP5.92□□□□□ -1.46
VAMP3-202ENST00000470357 KRTAP19-1Q8IUB9 90 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 UEVLDQ8IX04 471 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 PM20D2Q8IYS1 436 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 ARIH2OSQ8N7S6 290 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 LRRC75AQ8NAA5 344 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 ZNF540Q8NDQ6 660 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 BPIFB6Q8NFQ5 453 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 OR2T4Q8NH00 348 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 OR2V1Q8NHB1 315 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 MOSPD2Q8NHP6 518 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 C9orf43Q8TAL5 461 aaPredicted RBP5.92□□□□□ -1.46
VAMP3-202ENST00000470357 NEIL3Q8TAT5 605 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 CNIH3Q8TBE1 160 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 SMPDL3BQ92485 455 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 ABTB1Q969K4 478 aaPredicted RBP5.92□□□□□ -1.46
VAMP3-202ENST00000470357 PNPLA2Q96AD5 504 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 LRR1Q96L50 414 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 ADAD1Q96M93 576 aaKnown RBP5.92□□□□□ -1.46
VAMP3-202ENST00000470357 IL4I1Q96RQ9 567 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 SF3B5Q9BWJ5 86 aaKnown RBP5.92□□□□□ -1.46
VAMP3-202ENST00000470357 HES7Q9BYE0 225 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 DUSP21Q9H596 190 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 TMEM185BQ9H7F4 350 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 BATF3Q9NR55 127 aa5.92□□□□□ -1.46
VAMP3-202ENST00000470357 TAS2R5Q9NYW4 299 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms