RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 MEPEQ9NQ76 525 aaPredicted RBP11.4□□□□□ -0.58
CPSF4-210ENST00000469897 TMEM38BQ9NVV0 291 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 ZNF229Q9UJW7 825 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 TRIM33Q9UPN9 1127 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 SH3GLB1Q9Y371 365 aa11.4□□□□□ -0.58
CPSF4-210ENST00000469897 WNT9BO14905 357 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 ASAH2BP0C7U1 165 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 PGA4P0DJD7 388 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 PGA3P0DJD8 388 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 FUT1P19526 365 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 GPR6P46095 362 aaPredicted RBP11.39□□□□□ -0.59
CPSF4-210ENST00000469897 MYBPC1Q00872 1141 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 RUNX1T1Q06455 604 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 VMACQ2NL98 169 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 LIPNQ5VXI9 398 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 NANOGP8Q6NSW7 305 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 NKAIN4Q8IVV8 208 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 SLC30A8Q8IWU4 369 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 PAQR4Q8N4S7 273 aaPredicted RBP11.39□□□□□ -0.59
CPSF4-210ENST00000469897 SLC30A7Q8NEW0 376 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 CLDND2Q8NHS1 167 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 TSPEARQ8WU66 669 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 YIPF5Q969M3 257 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 MCHR2Q969V1 340 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 ZNF347Q96SE7 839 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 OR51B6Q9H340 312 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 NANOGQ9H9S0 305 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 TAAR3PQ9P1P4 343 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 SLC7A8Q9UHI5 535 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 FBXL3Q9UKT7 428 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 STAB1Q9NY15 2570 aa11.39□□□□□ -0.59
CPSF4-210ENST00000469897 A0A0G2JND7 137 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 A0A1W2PPW3 197 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 B4DSR2 109 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 FBP2O00757 339 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 SHOX2O60902 331 aaPredicted RBP11.38□□□□□ -0.59
CPSF4-210ENST00000469897 FARS2O95363 451 aaKnown RBP11.38□□□□□ -0.59
CPSF4-210ENST00000469897 TNFRSF1BP20333 461 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 PCGF2P35227 344 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 MAGEB1P43366 347 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 CRYBA2P53672 197 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 TMEM33P57088 247 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 CLRN1P58418 232 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 ERVS71-1P61550 626 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 RPS23P62266 143 aaKnown RBP11.38□□□□□ -0.59
CPSF4-210ENST00000469897 LAPTM4AQ15012 233 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 HIST3H3Q16695 136 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 RABL3Q5HYI8 236 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 INTS11Q5TA45 600 aaKnown RBP11.38□□□□□ -0.59
CPSF4-210ENST00000469897 TMEM53Q6P2H8 277 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 UGT2A3Q6UWM9 527 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 CCDC80Q76M96 950 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 SLC16A14Q7RTX9 510 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 LRRC18Q8N456 261 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 SYT14Q8NB59 555 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 PFN4Q8NHR9 129 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 STON2Q8WXE9 905 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 TSPAN32Q96QS1 320 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 ZNF426Q9BUY5 554 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 MRPL13Q9BYD1 178 aaKnown RBP11.38□□□□□ -0.59
CPSF4-210ENST00000469897 SLC19A3Q9BZV2 496 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 PCDHAC1Q9H158 963 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 LPAR2Q9HBW0 351 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 ZNF275Q9NSD4 429 aaPredicted RBP11.38□□□□□ -0.59
CPSF4-210ENST00000469897 TREM2Q9NZC2 230 aa11.38□□□□□ -0.59
CPSF4-210ENST00000469897 SLC22A23A1A5C7 686 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 HMGB1P1B2RPK0 211 aaPredicted RBP11.37□□□□□ -0.59
CPSF4-210ENST00000469897 FAM157AC9JC47 383 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 PPIHO43447 177 aaKnown RBP11.37□□□□□ -0.59
CPSF4-210ENST00000469897 TCF21O43680 179 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 CDC14BO60729 498 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 EDF1O60869 148 aaKnown RBP11.37□□□□□ -0.59
CPSF4-210ENST00000469897 IGHG1P01857 330 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 MT-ND1P03886 318 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 LCKP06239 509 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 ACHEP22303 614 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 AQP2P41181 271 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 DVL1P1P54792 670 aaPredicted RBP11.37□□□□□ -0.59
CPSF4-210ENST00000469897 UGT2B15P54855 530 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 UCP2P55851 309 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 RPL18Q07020 188 aaKnown RBP11.37□□□□□ -0.59
CPSF4-210ENST00000469897 PIN1Q13526 163 aaPredicted RBP11.37□□□□□ -0.59
CPSF4-210ENST00000469897 CYLC2Q14093 348 aaPredicted RBP11.37□□□□□ -0.59
CPSF4-210ENST00000469897 NKPD1Q17RQ9 610 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 SLC36A2Q495M3 483 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 METTL21CQ5VZV1 264 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 REP15Q6BDI9 236 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 RGS7BPQ6MZT1 257 aaPredicted RBP11.37□□□□□ -0.59
CPSF4-210ENST00000469897 RINLQ6ZS11 566 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 NANOGNBQ7Z5D8 188 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 RFLNBQ8N5W9 214 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 SYNPRQ8TBG9 265 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 RASSF5Q8WWW0 418 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 RACGAP1Q9H0H5 632 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 CDH20Q9HBT6 801 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 RIMS3Q9UJD0 308 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 RTTNQ86VV8 2226 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 PLCE1Q9P212 2302 aa11.37□□□□□ -0.59
CPSF4-210ENST00000469897 IQCMA0A1B0GVH7 501 aa11.36□□□□□ -0.59
CPSF4-210ENST00000469897 A0A1W2PRG6 482 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms