RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 SUCLG1P53597 346 aaKnown RBP3.47□□□□□ -1.85
LSM5-209ENST00000468872 NUP107P57740 925 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 PRPS1P60891 318 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 BST2Q10589 180 aaKnown RBP3.47□□□□□ -1.85
LSM5-209ENST00000468872 PSG7Q13046 419 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 DAZ2Q13117 558 aaKnown RBP3.47□□□□□ -1.85
LSM5-209ENST00000468872 GPNMBQ14956 572 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 PAGE3Q5JUK9 113 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 KDM7AQ6ZMT4 941 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 ZNF620Q6ZNG0 422 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 RNF165Q6ZSG1 346 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 NANOGNBQ7Z5D8 188 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 RALGPS2Q86X27 583 aaPredicted RBP3.47□□□□□ -1.85
LSM5-209ENST00000468872 MFSD6LQ8IWD5 586 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 FNDC5Q8NAU1 212 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 OR6C4Q8NGE1 309 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 FAM151AQ8WW52 585 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 UCN3Q969E3 161 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 IFT74Q96LB3 600 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 MS4A4EQ96PG1 132 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 RIOK1Q9BRS2 568 aaKnown RBP3.47□□□□□ -1.85
LSM5-209ENST00000468872 PKIBQ9C010 78 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 PLGRKTQ9HBL7 147 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 TM9SF3Q9HD45 589 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 DAZ3Q9NR90 486 aaKnown RBP3.47□□□□□ -1.85
LSM5-209ENST00000468872 NMRK1Q9NWW6 199 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 KCNIP1Q9NZI2 227 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 MTRF1LQ9UGC7 380 aaKnown RBP3.47□□□□□ -1.85
LSM5-209ENST00000468872 TRPM2O94759 1503 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 NCOR2Q9Y618 2525 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 FBN3Q75N90 2809 aa3.47□□□□□ -1.85
LSM5-209ENST00000468872 ZNF646O15015 1829 aaPredicted RBP3.47□□□□□ -1.85
LSM5-209ENST00000468872 DCHS1Q96JQ0 3298 aa3.46□□□□□ -1.85
LSM5-209ENST00000468872 HFM1A2PYH4 1435 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 BPTFQ12830 3046 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 FAM47DPA6NHR8 397 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 TRAF3IP2O43734 574 aaPredicted RBP3.46□□□□□ -1.86
LSM5-209ENST00000468872 ZNF861PO60384 105 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 CT62P0C5K7 136 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 CHTF8P0CG12 524 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 KITLGP21583 273 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 HNRNPH3P31942 346 aaKnown RBP3.46□□□□□ -1.86
LSM5-209ENST00000468872 CASP14P31944 242 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 BTCP35070 178 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 FDFT1P37268 417 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 VHLP40337 213 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 CRYBB2P43320 205 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 PLP1P60201 277 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 ACVR1Q04771 509 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 SSX2Q16385 188 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 NRF1Q16656 503 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 GPR157Q5UAW9 335 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 CTRB2Q6GPI1 263 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 OR4F6Q8NGB9 312 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 FANK1Q8TC84 345 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 SLC2A14Q8TDB8 520 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 FGF14Q92915 247 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 FCRL1Q96LA6 429 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 TMEM246Q9BRR3 403 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 GBA3Q9H227 469 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 CLCF1Q9UBD9 225 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 IKZF2Q9UKS7 526 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 ACACBO00763 2458 aa3.46□□□□□ -1.86
LSM5-209ENST00000468872 GOLGA8OA6NCC3 632 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 C12orf77C9JDV5 145 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 GOLGA8NF8WBI6 632 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 FAM189A1O60320 539 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 CST1P01037 141 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 ICAM2P13598 275 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 CMA1P23946 247 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 GDI1P31150 447 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 FMO3P31513 532 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 CTRLP40313 264 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 YAP1P46937 504 aaKnown RBP3.45□□□□□ -1.86
LSM5-209ENST00000468872 ENPEPQ07075 957 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 PDIA2Q13087 525 aaKnown RBP3.45□□□□□ -1.86
LSM5-209ENST00000468872 LRRC74BQ6ZQY2 392 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 SLC25A48Q6ZT89 311 aaKnown RBP3.45□□□□□ -1.86
LSM5-209ENST00000468872 PAQR7Q86WK9 346 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 PLA2G4DQ86XP0 818 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 DCAF4L2Q8NA75 395 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 SUMF2Q8NBJ7 301 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 OR56B2PQ8NGI1 322 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 KCNG3Q8TAE7 436 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 ACOT11Q8WXI4 607 aaPredicted RBP3.45□□□□□ -1.86
LSM5-209ENST00000468872 SMARCD2Q92925 531 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 OR8B4Q96RC9 309 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 CCDC77Q9BR77 488 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 RIOK2Q9BVS4 552 aaKnown RBP3.45□□□□□ -1.86
LSM5-209ENST00000468872 IL26Q9NPH9 171 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 KLHL28Q9NXS3 571 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 SPATA7Q9P0W8 599 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 CELA1Q9UNI1 258 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 CSDC2Q9Y534 153 aaKnown RBP3.45□□□□□ -1.86
LSM5-209ENST00000468872 KIF15Q9NS87 1388 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 FAM208BQ5VWN6 2430 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 ARHGEF5Q12774 1597 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 ABCA12Q86UK0 2595 aa3.45□□□□□ -1.86
LSM5-209ENST00000468872 LRRIQ1Q96JM4 1722 aa3.44□□□□□ -1.86
LSM5-209ENST00000468872 DOPEY1Q5JWR5 2465 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms