RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 ALG10BQ5I7T1 473 aa11.77□□□□□ -0.53
RPP40-204ENST00000468105 LINC00114Q6XXX2 140 aa11.77□□□□□ -0.53
RPP40-204ENST00000468105 TMPPEQ6ZT21 453 aa11.77□□□□□ -0.53
RPP40-204ENST00000468105 UBE2J2Q8N2K1 259 aa11.77□□□□□ -0.53
RPP40-204ENST00000468105 CADM2Q8N3J6 435 aa11.77□□□□□ -0.53
RPP40-204ENST00000468105 ACOT11Q8WXI4 607 aaPredicted RBP11.77□□□□□ -0.53
RPP40-204ENST00000468105 PRSS27Q9BQR3 290 aa11.77□□□□□ -0.53
RPP40-204ENST00000468105 ZNF426Q9BUY5 554 aa11.77□□□□□ -0.53
RPP40-204ENST00000468105 C8orf4Q9NR00 106 aa11.77□□□□□ -0.53
RPP40-204ENST00000468105 SLC17A5Q9NRA2 495 aa11.77□□□□□ -0.53
RPP40-204ENST00000468105 CTPS2Q9NRF8 586 aa11.77□□□□□ -0.53
RPP40-204ENST00000468105 SLC7A10Q9NS82 523 aa11.77□□□□□ -0.53
RPP40-204ENST00000468105 MALT1Q9UDY8 824 aa11.77□□□□□ -0.53
RPP40-204ENST00000468105 TMEFF2Q9UIK5 374 aaPredicted RBP11.77□□□□□ -0.53
RPP40-204ENST00000468105 TMCC3Q9ULS5 477 aa11.77□□□□□ -0.53
RPP40-204ENST00000468105 SLC7A7Q9UM01 511 aa11.77□□□□□ -0.53
RPP40-204ENST00000468105 A0A087WUJ7 227 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 LOC390937A0A1W2PQ73 354 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 SH3PXD2BA1X283 911 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 HTR3EA5X5Y0 456 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 LYNX1G3V0Z9 82 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 NDUFS8O00217 210 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 LYNX1P0DP58 116 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 APOBEC1P41238 236 aaKnown RBP11.76□□□□□ -0.53
RPP40-204ENST00000468105 POLR2HP52434 150 aaKnown RBP11.76□□□□□ -0.53
RPP40-204ENST00000468105 TSPO2Q5TGU0 170 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 KLHL17Q6TDP4 642 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 ZDHHC13Q8IUH4 622 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 RNF113BQ8IZP6 322 aaKnown RBP11.76□□□□□ -0.53
RPP40-204ENST00000468105 ICA1LQ8NDH6 482 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 SLC7A13Q8TCU3 470 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 APH1AQ96BI3 265 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 VRK1Q99986 396 aaPredicted RBP11.76□□□□□ -0.53
RPP40-204ENST00000468105 TMEM43Q9BTV4 400 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 C9orf16Q9BUW7 83 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 SLC19A3Q9BZV2 496 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 OR11A1Q9GZK7 315 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 GABARAPL1Q9H0R8 117 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 SEMA6AQ9H2E6 1030 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 ASB6Q9NWX5 421 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 TAS2R16Q9NYV7 291 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 RHCGQ9UBD6 479 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 OSGIN1Q9UJX0 560 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 NOSIPQ9Y314 301 aaKnown RBP11.76□□□□□ -0.53
RPP40-204ENST00000468105 PMF1-BGLAPU3KQ54 211 aa11.76□□□□□ -0.53
RPP40-204ENST00000468105 A0A087WUU8 490 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 IGHV1-18A0A0C4DH31 117 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 G3V2T6 193 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 IGF2P01344 180 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 TACSTD2P09758 323 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 HNF1AP20823 631 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 FKBP2P26885 142 aaKnown RBP11.75□□□□□ -0.53
RPP40-204ENST00000468105 TACR3P29371 465 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 COMPP49747 757 aaPredicted RBP11.75□□□□□ -0.53
RPP40-204ENST00000468105 LGALS3BPQ08380 585 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 ADIPOQQ15848 244 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 SNCBQ16143 134 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 MICAQ29983 383 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 HIKESHIQ53FT3 197 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 FGD3Q5JSP0 725 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 OGFRL1Q5TC84 451 aaPredicted RBP11.75□□□□□ -0.53
RPP40-204ENST00000468105 C5orf46Q6UWT4 87 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 TMEM179BQ7Z7N9 219 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 MYPOPQ86VE0 399 aaPredicted RBP11.75□□□□□ -0.53
RPP40-204ENST00000468105 NKAIN4Q8IVV8 208 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 OR52J3Q8NH60 311 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 GIPC3Q8TF64 312 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 TMEM239Q8WW34 195 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 OAZ3Q9UMX2 235 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 U3KQV3 271 aa11.75□□□□□ -0.53
RPP40-204ENST00000468105 TMED7-TICAM2A0A0A6YYA0 188 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 TRBV4-1A0A0J9YWV2 114 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 TMEM89A2RUT3 159 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 SULT2B1O00204 365 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 ZNF208O43345 1280 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 CCNB2O95067 398 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 ANXA8P13928 327 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 FUT4P22083 530 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 CXCR1P25024 350 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 GIFP27352 417 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 CALCRP30988 508 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 IFNGR2P38484 337 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 CDH15P55291 814 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 MERTKQ12866 999 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 PPP1R8Q12972 351 aaKnown RBP11.74□□□□□ -0.53
RPP40-204ENST00000468105 PDK3Q15120 406 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 SYT14P1Q58G82 188 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 ZNF770Q6IQ21 691 aaPredicted RBP11.74□□□□□ -0.53
RPP40-204ENST00000468105 C3orf33Q6P1S2 294 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 TTC33Q6PID6 262 aaPredicted RBP11.74□□□□□ -0.53
RPP40-204ENST00000468105 ZNF730Q6ZMV8 503 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 WDR88Q6ZMY6 472 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 C1orf229Q6ZS94 237 aaPredicted RBP11.74□□□□□ -0.53
RPP40-204ENST00000468105 MBOAT2Q6ZWT7 520 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 RRM2BQ7LG56 351 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 ADGRG3Q86Y34 549 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 EPHX4Q8IUS5 362 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 PACRGLQ8N7B6 248 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 OR10G2Q8NGC3 310 aa11.74□□□□□ -0.53
RPP40-204ENST00000468105 STK35Q8TDR2 534 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms