RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 PTHP01270 115 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 CXCR1P25024 350 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 CHATP28329 748 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 HMOX2P30519 316 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 CRATP43155 626 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 C1DQ13901 141 aaKnown RBP9.57□□□□□ -0.88
VPS26A-204ENST00000467852 MFSD13AQ14CX5 517 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 GRTP1Q5TC63 336 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 CD276Q5ZPR3 534 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 WDR25Q64LD2 544 aaPredicted RBP9.57□□□□□ -0.88
VPS26A-204ENST00000467852 ANKRD26P1Q6NSI1 321 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 KDM8Q8N371 416 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 FAM71CQ8NEG0 241 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 VANGL1Q8TAA9 524 aaPredicted RBP9.57□□□□□ -0.88
VPS26A-204ENST00000467852 METTL6Q8TCB7 284 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 NPRL2Q8WTW4 380 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 MAGEB18Q96M61 343 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 RAB18Q9NP72 206 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 TBK1Q9UHD2 729 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 SMIM24O75264 130 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 STX11O75558 287 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 KLHL2O95198 593 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 PAHP00439 452 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 LHBP01229 141 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 PATE4P0C8F1 98 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 CXCR5P32302 372 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 PDIA2Q13087 525 aaKnown RBP9.56□□□□□ -0.88
VPS26A-204ENST00000467852 TP53BP2Q13625 1128 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 PHYHD1Q5SRE7 291 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 THEM4Q5T1C6 240 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 KRT77Q7Z794 578 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 PNLDC1Q8NA58 520 aaKnown RBP9.56□□□□□ -0.88
VPS26A-204ENST00000467852 C8orf46Q8TAG6 207 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 FAM76AQ8TAV0 307 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 FOXB1Q99853 325 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 TMEM246Q9BRR3 403 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 DCTN5Q9BTE1 182 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 MSL2Q9HCI7 577 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 TCF7L2Q9NQB0 619 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 INPP5EQ9NRR6 644 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 SH3BP4Q9P0V3 963 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 ZNF225Q9UK10 706 aa9.56□□□□□ -0.88
VPS26A-204ENST00000467852 POLR3HQ9Y535 204 aaPredicted RBP9.56□□□□□ -0.88
VPS26A-204ENST00000467852 C22orf46C9J442 243 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 IFNL4K9M1U5 179 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 RAMP3O60896 148 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 FRKP42685 505 aaPredicted RBP9.55□□□□□ -0.88
VPS26A-204ENST00000467852 FAM153CQ494X1 144 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 CAVIN1Q6NZI2 390 aaKnown RBP9.55□□□□□ -0.88
VPS26A-204ENST00000467852 TMEM53Q6P2H8 277 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 LHFPL2Q6ZUX7 228 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 LSRQ86X29 649 aaPredicted RBP9.55□□□□□ -0.88
VPS26A-204ENST00000467852 VRK2Q86Y07 508 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 SKA3Q8IX90 412 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 CTAGE3PQ8IX95 158 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 ZNF483Q8TF39 744 aaPredicted RBP9.55□□□□□ -0.88
VPS26A-204ENST00000467852 TFAP2CQ92754 450 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 PPCDCQ96CD2 204 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 OXGR1Q96P68 337 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 OR2M2Q96R28 347 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 ZNF382Q96SR6 550 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 NPFFR1Q9GZQ6 430 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 PCDHAC1Q9H158 963 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 SEMA6AQ9H2E6 1030 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 EXOSC3Q9NQT5 275 aaKnown RBP9.55□□□□□ -0.88
VPS26A-204ENST00000467852 MKLN1Q9UL63 735 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 GUCA1BQ9UMX6 200 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 MAB21L2Q9Y586 359 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 MUC4Q99102 2169 aa9.55□□□□□ -0.88
VPS26A-204ENST00000467852 ALMS1Q8TCU4 4167 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 IQCMA0A1B0GVH7 501 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 PRAMEF27A3QJZ7 478 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 SURF4O15260 269 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 FCMRO60667 390 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 ENTPD5O75356 428 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 BCAS1O75363 584 aaPredicted RBP9.54□□□□□ -0.88
VPS26A-204ENST00000467852 ZNF205O95201 554 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 AK1P00568 194 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 THY1P04216 161 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 C2P06681 752 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 RPS17P08708 135 aaKnown RBP9.54□□□□□ -0.88
VPS26A-204ENST00000467852 ZNF26P17031 533 aaPredicted RBP9.54□□□□□ -0.88
VPS26A-204ENST00000467852 MPV17P39210 176 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 GATA4P43694 442 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 CCT3P49368 545 aaKnown RBP9.54□□□□□ -0.88
VPS26A-204ENST00000467852 NPY4RP50391 375 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 FASTKD3Q14CZ7 662 aaKnown RBP9.54□□□□□ -0.88
VPS26A-204ENST00000467852 ZNF385BQ569K4 471 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 TEX35Q5T0J7 233 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 SPATA46Q5T0L3 261 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 MBNL2Q5VZF2 373 aaKnown RBP9.54□□□□□ -0.88
VPS26A-204ENST00000467852 CARD17Q5XLA6 110 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 UNQ6126/PRO20091Q6UXV3 157 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 C20orf196Q8IYI0 205 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 TMEM123Q8N131 208 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 SCAIQ8N9R8 606 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 VPS37AQ8NEZ2 397 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 OR56A1Q8NGH5 318 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 C10orf82Q8WW14 230 aa9.54□□□□□ -0.88
VPS26A-204ENST00000467852 OIT3Q8WWZ8 545 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms