RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 WNT2P09544 360 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 LINC00032P0C843 101 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 GKN3PP0CG01 181 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 IL7RP16871 459 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 NCF2P19878 526 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-203ENST00000467533 MAPK1P28482 360 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 MPV17P39210 176 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 IER3P46695 156 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 PTGR1Q14914 329 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 ZNF718Q3SXZ3 478 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 ZMAT1Q5H9K5 638 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 TMEM255AQ5JRV8 349 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 CFAP157Q5JU67 520 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 ZNF774Q6NX45 483 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 ZDHHC24Q6UX98 284 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 VASH1Q7L8A9 365 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-203ENST00000467533 LDLRAD3Q86YD5 345 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 KLBQ86Z14 1044 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 ZNF440Q8IYI8 595 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 CLECL1Q8IZS7 167 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 LYG1Q8N1E2 194 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 ZNF283Q8N7M2 679 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 VPS37AQ8NEZ2 397 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 ZNF417Q8TAU3 575 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 MIPOL1Q8TD10 442 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 STK35Q8TDR2 534 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 DACT3Q96B18 629 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-203ENST00000467533 ZNF587Q96SQ5 575 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-203ENST00000467533 ARHGDIGQ99819 225 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 DUSP26Q9BV47 211 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 MECRQ9BV79 373 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 PTDSS2Q9BVG9 487 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 SLC19A3Q9BZV2 496 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 TRIM15Q9C019 465 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 CGGBP1Q9UFW8 167 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-203ENST00000467533 ZDHHC8Q9ULC8 765 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 NOTCH3Q9UM47 2321 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 IQCMA0A1B0GVH7 501 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 BTBD17A6NE02 478 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 ENTPD5O75356 428 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 TSPAN9O75954 239 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 CHEK2O96017 543 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 PTHP01270 115 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 NQO1P15559 274 aaKnown RBP8.52□□□□□ -1.05
HDAC3-203ENST00000467533 CCNOP22674 350 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 CBLP22681 906 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 CRHR1P34998 444 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 LIPAP38571 399 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 NSUN5P1Q3KNT7 163 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 KLHL22Q53GT1 634 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 THEM4Q5T1C6 240 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 PIWIL3Q7Z3Z3 882 aaKnown RBP8.52□□□□□ -1.05
HDAC3-203ENST00000467533 GALNT4Q8N4A0 578 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 SLC22A24Q8N4F4 322 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 KRTCAP2Q8N6L1 136 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 FITM2Q8N6M3 262 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 SCCPDHQ8NBX0 429 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 OR8B3Q8NGG8 313 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 OR4A15Q8NGL6 344 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 COQ8BQ96D53 544 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 CCDC126Q96EE4 140 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 NEIL1Q96FI4 390 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-203ENST00000467533 LRR1Q96L50 414 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 OR8B2Q96RD0 313 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 SIGLEC11Q96RL6 698 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 SH3GL3Q99963 347 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 B9D2Q9BPU9 175 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 C1orf50Q9BV19 199 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 DPAGT1Q9H3H5 408 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 TMEM165Q9HC07 324 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 MSL2Q9HCI7 577 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 NINJ2Q9NZG7 142 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 GIMAP2Q9UG22 337 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 FOXJ3Q9UPW0 622 aa8.52□□□□□ -1.05
HDAC3-203ENST00000467533 UTP11Q9Y3A2 253 aaKnown RBP8.52□□□□□ -1.05
HDAC3-203ENST00000467533 RYR2Q92736 4967 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 DYNC2H1Q8NCM8 4307 aaKnown RBP8.51□□□□□ -1.05
HDAC3-203ENST00000467533 A0A0U1RQK1 487 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 ANKRD61A6NGH8 418 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 ZNF726A6NNF4 738 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 P2RY10O00398 339 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 AZIN1O14977 448 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 MGRN1O60291 552 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 LYPLA1O75608 230 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-203ENST00000467533 FARS2O95363 451 aaKnown RBP8.51□□□□□ -1.05
HDAC3-203ENST00000467533 DBIP07108 87 aaKnown RBP8.51□□□□□ -1.05
HDAC3-203ENST00000467533 SNRPAP09012 282 aaKnown RBP8.51□□□□□ -1.05
HDAC3-203ENST00000467533 MYL2P10916 166 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 HLA-DOBP13765 273 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 TNFRSF1AP19438 455 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 TNFSF4P23510 183 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 GRPRP30550 384 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 GABRA5P31644 462 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 APLNRP35414 380 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 CSNK1A1P48729 337 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 NAA20P61599 178 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 PLP2Q04941 152 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 C2orf54Q08AI8 447 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 SMU1Q2TAY7 513 aa8.51□□□□□ -1.05
HDAC3-203ENST00000467533 PGS1Q32NB8 556 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms