RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 PRR25Q96S07 402 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 ZNF382Q96SR6 550 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 NKX3-1Q99801 234 aaPredicted RBP10.31□□□□□ -0.76
UBR4-210ENST00000466969 CPNE1Q99829 537 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 FOXB1Q99853 325 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 FAM234AQ9H0X4 552 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 SIRPDQ9H106 197 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 TCF7L2Q9NQB0 619 aa10.31□□□□□ -0.76
UBR4-210ENST00000466969 IFNL4K9M1U5 179 aa10.3□□□□□ -0.76
UBR4-210ENST00000466969 DNALI1O14645 258 aaPredicted RBP10.3□□□□□ -0.76
UBR4-210ENST00000466969 UGT2B17O75795 530 aa10.3□□□□□ -0.76
UBR4-210ENST00000466969 EEF1B2P24534 225 aaKnown RBP10.3□□□□□ -0.76
UBR4-210ENST00000466969 SPRP35270 261 aaPredicted RBP10.3□□□□□ -0.76
UBR4-210ENST00000466969 NPY4RP50391 375 aa10.3□□□□□ -0.76
UBR4-210ENST00000466969 ARF6P62330 175 aa10.3□□□□□ -0.76
UBR4-210ENST00000466969 PHYHD1Q5SRE7 291 aa10.3□□□□□ -0.76
UBR4-210ENST00000466969 CARD17Q5XLA6 110 aa10.3□□□□□ -0.76
UBR4-210ENST00000466969 ANKRD26P1Q6NSI1 321 aa10.3□□□□□ -0.76
UBR4-210ENST00000466969 LINC00482Q8N8I6 264 aa10.3□□□□□ -0.76
UBR4-210ENST00000466969 FAM71CQ8NEG0 241 aa10.3□□□□□ -0.76
UBR4-210ENST00000466969 WIPF2Q8TF74 440 aaPredicted RBP10.3□□□□□ -0.76
UBR4-210ENST00000466969 C10orf82Q8WW14 230 aa10.3□□□□□ -0.76
UBR4-210ENST00000466969 OR2M2Q96R28 347 aa10.3□□□□□ -0.76
UBR4-210ENST00000466969 SDF2Q99470 211 aa10.3□□□□□ -0.76
UBR4-210ENST00000466969 SIRT5Q9NXA8 310 aa10.3□□□□□ -0.76
UBR4-210ENST00000466969 KCNE5Q9UJ90 142 aa10.3□□□□□ -0.76
UBR4-210ENST00000466969 MUC4Q99102 2169 aa10.3□□□□□ -0.76
UBR4-210ENST00000466969 DNAH10Q8IVF4 4471 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 HERC1Q15751 4861 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 STX16-NPEPL1H3BU86 382 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 PPP6CO00743 305 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 STX16O14662 325 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 SURF4O15260 269 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 CXCR1P25024 350 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 HMOX2P30519 316 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 ANXA11P50995 505 aaKnown RBP10.29□□□□□ -0.76
UBR4-210ENST00000466969 CD83Q01151 205 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 HABP2Q14520 560 aaPredicted RBP10.29□□□□□ -0.76
UBR4-210ENST00000466969 FAM153CQ494X1 144 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 ZNF404Q494X3 552 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 MTX3Q5HYI7 312 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 MBNL2Q5VZF2 373 aaKnown RBP10.29□□□□□ -0.76
UBR4-210ENST00000466969 UNQ6126/PRO20091Q6UXV3 157 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 RPS27LQ71UM5 84 aaKnown RBP10.29□□□□□ -0.76
UBR4-210ENST00000466969 SKA3Q8IX90 412 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 CENPLQ8N0S6 344 aaPredicted RBP10.29□□□□□ -0.76
UBR4-210ENST00000466969 OR2Z1Q8NG97 314 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 FGFBP3Q8TAT2 258 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 SLC7A13Q8TCU3 470 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 KLF14Q8TD94 323 aaPredicted RBP10.29□□□□□ -0.76
UBR4-210ENST00000466969 GRK7Q8WTQ7 553 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 ITLN1Q8WWA0 313 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 OR5M11Q96RB7 305 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 MYLK2Q9H1R3 596 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 EDA2RQ9HAV5 297 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 IL19Q9UHD0 177 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 MKLN1Q9UL63 735 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 POLR3HQ9Y535 204 aaPredicted RBP10.29□□□□□ -0.76
UBR4-210ENST00000466969 UBR4Q5T4S7 5183 aa10.29□□□□□ -0.76
UBR4-210ENST00000466969 IQCMA0A1B0GVH7 501 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 PRAMEF27A3QJZ7 478 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 TIMM8AO60220 97 aaPredicted RBP10.28□□□□□ -0.76
UBR4-210ENST00000466969 ENTPD5O75356 428 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 BCAS1O75363 584 aaPredicted RBP10.28□□□□□ -0.76
UBR4-210ENST00000466969 STX11O75558 287 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 CCNOP22674 350 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 PLP2Q04941 152 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 TP53BP2Q13625 1128 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 PPP1R7Q15435 360 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 RUNDC3AQ59EK9 446 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 ARSJQ5FYB0 599 aaPredicted RBP10.28□□□□□ -0.76
UBR4-210ENST00000466969 TMEM255AQ5JRV8 349 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 TMEM53Q6P2H8 277 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 TMEM123Q8N131 208 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 FBXO36Q8NEA4 188 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 VPS37AQ8NEZ2 397 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 SLC25A40Q8TBP6 338 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 OXGR1Q96P68 337 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 SSX3Q99909 188 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 ULBP2Q9BZM5 246 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 EXOSC3Q9NQT5 275 aaKnown RBP10.28□□□□□ -0.76
UBR4-210ENST00000466969 SH3BP4Q9P0V3 963 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 TMCO1Q9UM00 188 aa10.28□□□□□ -0.76
UBR4-210ENST00000466969 TSSC4Q9Y5U2 329 aaPredicted RBP10.28□□□□□ -0.76
UBR4-210ENST00000466969 A0A1B0GVI7 797 aa10.27□□□□□ -0.77
UBR4-210ENST00000466969 TCRBV4S1A1TA0A5B7 111 aa10.27□□□□□ -0.77
UBR4-210ENST00000466969 FCMRO60667 390 aa10.27□□□□□ -0.77
UBR4-210ENST00000466969 CYB5R3P00387 301 aaPredicted RBP10.27□□□□□ -0.77
UBR4-210ENST00000466969 MYF6P23409 242 aa10.27□□□□□ -0.77
UBR4-210ENST00000466969 APLNRP35414 380 aa10.27□□□□□ -0.77
UBR4-210ENST00000466969 VEGFCP49767 419 aa10.27□□□□□ -0.77
UBR4-210ENST00000466969 GUCA2AQ02747 115 aa10.27□□□□□ -0.77
UBR4-210ENST00000466969 CHI3L2Q15782 390 aa10.27□□□□□ -0.77
UBR4-210ENST00000466969 LYPD2Q6UXB3 125 aa10.27□□□□□ -0.77
UBR4-210ENST00000466969 ZNF841Q6ZN19 808 aa10.27□□□□□ -0.77
UBR4-210ENST00000466969 DCDC5Q6ZRR9 648 aa10.27□□□□□ -0.77
UBR4-210ENST00000466969 CCDC121Q6ZUS5 278 aa10.27□□□□□ -0.77
UBR4-210ENST00000466969 VMO1Q7Z5L0 202 aa10.27□□□□□ -0.77
UBR4-210ENST00000466969 ZER1Q7Z7L7 766 aa10.27□□□□□ -0.77
UBR4-210ENST00000466969 C20orf196Q8IYI0 205 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 189.9 ms