RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 MCHR2Q969V1 340 aa17.78■□□□□ 0.44
PTCD3-206ENST00000465560 Q96M85 177 aa17.78■□□□□ 0.44
PTCD3-206ENST00000465560 ZNF570Q96NI8 536 aa17.78■□□□□ 0.44
PTCD3-206ENST00000465560 FOXB1Q99853 325 aa17.78■□□□□ 0.44
PTCD3-206ENST00000465560 NTN4Q9HB63 628 aa17.78■□□□□ 0.44
PTCD3-206ENST00000465560 PDP1Q9P0J1 537 aaPredicted RBP17.78■□□□□ 0.44
PTCD3-206ENST00000465560 POFUT2Q9Y2G5 429 aa17.78■□□□□ 0.44
PTCD3-206ENST00000465560 CDH10Q9Y6N8 788 aa17.78■□□□□ 0.44
PTCD3-206ENST00000465560 CADP27708 2225 aa17.78■□□□□ 0.44
PTCD3-206ENST00000465560 A0A096LPE4 126 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 ARPC4-TTLL3A0A0A6YYG9 625 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 A0A1W2PPZ6 126 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 A0A1W2PR80 420 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 DHHO43323 396 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 FCGR1AP12314 374 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 APEHP13798 732 aaKnown RBP17.77■□□□□ 0.44
PTCD3-206ENST00000465560 HOXB1P14653 301 aaPredicted RBP17.77■□□□□ 0.44
PTCD3-206ENST00000465560 GSTM3P21266 225 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 FASP25445 335 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 LOXP28300 417 aaPredicted RBP17.77■□□□□ 0.44
PTCD3-206ENST00000465560 SDHAP31040 664 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 RPS6KA3P51812 740 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 NR1H2P55055 460 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 CD47Q08722 323 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 ATP6AP1Q15904 470 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 MESTQ5EB52 335 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 C10orf128Q5T292 105 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 FBXW10Q5XX13 1052 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 RASSF6Q6ZTQ3 369 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 CLDN22Q8N7P3 220 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 FNDC8Q8TC99 324 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 GTPBP3Q969Y2 492 aaKnown RBP17.77■□□□□ 0.44
PTCD3-206ENST00000465560 NMD3Q96D46 503 aaKnown RBP17.77■□□□□ 0.44
PTCD3-206ENST00000465560 PIK3IP1Q96FE7 263 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 SAMD8Q96LT4 415 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 FEVQ99581 238 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 CLEC4MQ9H2X3 399 aaPredicted RBP17.77■□□□□ 0.44
PTCD3-206ENST00000465560 SMURF2Q9HAU4 748 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 NPAP1Q9NZP6 1156 aa17.77■□□□□ 0.44
PTCD3-206ENST00000465560 MAGED1Q9Y5V3 778 aaPredicted RBP17.77■□□□□ 0.44
PTCD3-206ENST00000465560 TEX13CA0A0J9YWL9 993 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 XKRYO14609 159 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 ARHGEF9O43307 516 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 SEC14L2O76054 403 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 TXNDC12O95881 172 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 WNT11O96014 354 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 ARHGDIAP52565 204 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 UBE2NP61088 152 aaKnown RBP17.76■□□□□ 0.43
PTCD3-206ENST00000465560 MYBPC1Q00872 1141 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 KRR1Q13601 381 aaKnown RBP17.76■□□□□ 0.43
PTCD3-206ENST00000465560 SHQ1Q6PI26 577 aaKnown RBP17.76■□□□□ 0.43
PTCD3-206ENST00000465560 CD300LDQ6UXZ3 194 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 ZNF813Q6ZN06 617 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 RASD2Q96D21 266 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 NRBF2Q96F24 287 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 PLPPR2Q96GM1 343 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 NIPSNAP1Q9BPW8 284 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 EGLN3Q9H6Z9 239 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 IL20Q9NYY1 176 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 IER3IP1Q9Y5U9 82 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 TACC2O95359 2948 aa17.76■□□□□ 0.43
PTCD3-206ENST00000465560 RAI1Q7Z5J4 1906 aaPredicted RBP17.75■□□□□ 0.43
PTCD3-206ENST00000465560 IMPA2O14732 288 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 ARPC3O15145 178 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 AHCYL1O43865 530 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 PPP1R3DO95685 299 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 B4GALT1P15291 398 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 PAX7P23759 505 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 KRTAP10-9P60411 292 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 FMODQ06828 376 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 COX10Q12887 443 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 THEM4Q5T1C6 240 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 HS3ST5Q8IZT8 346 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 OR52L1Q8NGH7 329 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 RBP7Q96R05 134 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 BDH2Q9BUT1 245 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 IFT27Q9BW83 186 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 DENND2DQ9H6A0 471 aaPredicted RBP17.75■□□□□ 0.43
PTCD3-206ENST00000465560 ESRP2Q9H6T0 727 aaKnown RBP17.75■□□□□ 0.43
PTCD3-206ENST00000465560 TMEM38BQ9NVV0 291 aa17.75■□□□□ 0.43
PTCD3-206ENST00000465560 IGKV1D-43A0A0B4J1Z2 117 aa17.74■□□□□ 0.43
PTCD3-206ENST00000465560 SLC2A10O95528 541 aa17.74■□□□□ 0.43
PTCD3-206ENST00000465560 ZNF84P51523 738 aa17.74■□□□□ 0.43
PTCD3-206ENST00000465560 ZSCAN26Q16670 478 aa17.74■□□□□ 0.43
PTCD3-206ENST00000465560 NCMAPQ5T1S8 102 aa17.74■□□□□ 0.43
PTCD3-206ENST00000465560 ZFP1Q6P2D0 407 aa17.74■□□□□ 0.43
PTCD3-206ENST00000465560 SLC25A47Q6Q0C1 308 aa17.74■□□□□ 0.43
PTCD3-206ENST00000465560 ADCK1Q86TW2 530 aa17.74■□□□□ 0.43
PTCD3-206ENST00000465560 CDC20BQ86Y33 519 aa17.74■□□□□ 0.43
PTCD3-206ENST00000465560 CCDC36Q8IYA8 594 aa17.74■□□□□ 0.43
PTCD3-206ENST00000465560 OR5K1Q8NHB7 308 aa17.74■□□□□ 0.43
PTCD3-206ENST00000465560 PYDC1Q8WXC3 89 aa17.74■□□□□ 0.43
PTCD3-206ENST00000465560 ERMAPQ96PL5 475 aaPredicted RBP17.74■□□□□ 0.43
PTCD3-206ENST00000465560 HS3ST6Q96QI5 342 aa17.74■□□□□ 0.43
PTCD3-206ENST00000465560 PLA2G12AQ9BZM1 189 aa17.74■□□□□ 0.43
PTCD3-206ENST00000465560 CSMD2Q7Z408 3487 aa17.74■□□□□ 0.43
PTCD3-206ENST00000465560 ROS1P08922 2347 aa17.73■□□□□ 0.43
PTCD3-206ENST00000465560 AKAP6Q13023 2319 aa17.73■□□□□ 0.43
PTCD3-206ENST00000465560 A0A1W2PPR1 153 aa17.73■□□□□ 0.43
PTCD3-206ENST00000465560 SLC22A23A1A5C7 686 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms