RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 FPR3P25089 353 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 GSSP48637 474 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 CD47Q08722 323 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 MICAQ29983 383 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 MESTQ5EB52 335 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 OTPQ5XKR4 325 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 ZNF770Q6IQ21 691 aaPredicted RBP10.18□□□□□ -0.78
CUX1-207ENST00000465461 SMARCD3Q6STE5 483 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 ZNF704Q6ZNC4 412 aaPredicted RBP10.18□□□□□ -0.78
CUX1-207ENST00000465461 FAM122BQ7Z309 247 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 MYPOPQ86VE0 399 aaPredicted RBP10.18□□□□□ -0.78
CUX1-207ENST00000465461 HS3ST5Q8IZT8 346 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 AQP11Q8NBQ7 271 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 FANK1Q8TC84 345 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 AKAP1Q92667 903 aaKnown RBP eCLIP10.18□□□□□ -0.78
CUX1-207ENST00000465461 SAMD8Q96LT4 415 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 FOXN4Q96NZ1 517 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 KCNK17Q96T54 332 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 SH3GL3Q99963 347 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 OR52D1Q9H346 318 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 MMADHCQ9H3L0 296 aaPredicted RBP10.18□□□□□ -0.78
CUX1-207ENST00000465461 ESRP2Q9H6T0 727 aaKnown RBP10.18□□□□□ -0.78
CUX1-207ENST00000465461 NGBQ9NPG2 151 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 CCM2LQ9NUG4 571 aaPredicted RBP10.18□□□□□ -0.78
CUX1-207ENST00000465461 GRHPRQ9UBQ7 328 aa10.18□□□□□ -0.78
CUX1-207ENST00000465461 MAGED1Q9Y5V3 778 aaPredicted RBP10.18□□□□□ -0.78
CUX1-207ENST00000465461 ARPC4-TTLL3A0A0A6YYG9 625 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 IGHV1-18A0A0C4DH31 117 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 SOCS2O14508 198 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 WNT11O96014 354 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 CD79AP11912 226 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 PRKACGP22612 351 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 CD40P25942 277 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 IFNGR2P38484 337 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 NR1H2P55055 460 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 SH3BGRP55822 239 aaPredicted RBP10.17□□□□□ -0.78
CUX1-207ENST00000465461 TSPAN31Q12999 210 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 ETFDHQ16134 617 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 RFX4Q33E94 735 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 ANKDD1AQ495B1 522 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 CLEC12AQ5QGZ9 265 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 SLC25A47Q6Q0C1 308 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 CDH24Q86UP0 819 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 MDP1Q86V88 176 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 SKA3Q8IX90 412 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 LRRC18Q8N456 261 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 ARIH2OSQ8N7S6 290 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 PAPD5Q8NDF8 572 aaKnown RBP10.17□□□□□ -0.78
CUX1-207ENST00000465461 OR10G2Q8NGC3 310 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 NMD3Q96D46 503 aaKnown RBP10.17□□□□□ -0.78
CUX1-207ENST00000465461 BOD1Q96IK1 185 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 ZNF570Q96NI8 536 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 ERMAPQ96PL5 475 aaPredicted RBP10.17□□□□□ -0.78
CUX1-207ENST00000465461 NIPSNAP1Q9BPW8 284 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 TMEM204Q9BSN7 226 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 PLA2G12AQ9BZM1 189 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 NRIP3Q9NQ35 241 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 TMEM38BQ9NVV0 291 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 ZNF224Q9NZL3 707 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 PDP1Q9P0J1 537 aaPredicted RBP10.17□□□□□ -0.78
CUX1-207ENST00000465461 RNF115Q9Y4L5 304 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 ABCA4P78363 2273 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 DCHS2Q6V1P9 2916 aa10.17□□□□□ -0.78
CUX1-207ENST00000465461 CENPEQ02224 2701 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 NPIPB13A6NJU9 1138 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 SHISA9B4DS77 424 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 NPIPB4C9JG80 1138 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 CIB2O75838 187 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 GOSR1O95249 250 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 SOX14O95416 240 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 SCG5P05408 212 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 CDKN2AP42771 156 aaKnown RBP10.16□□□□□ -0.78
CUX1-207ENST00000465461 NPRL3Q12980 569 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 TAF11Q15544 211 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 KLHL17Q6TDP4 642 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 DPY19L2P2Q6ZN68 376 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 ZNF620Q6ZNG0 422 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 PTCHD4Q6ZW05 846 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 SLC22A24Q8N4F4 322 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 OR8D4Q8NGM9 314 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 MAGEE2Q8TD90 523 aaPredicted RBP10.16□□□□□ -0.78
CUX1-207ENST00000465461 GIPC3Q8TF64 312 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 POP5Q969H6 163 aaKnown RBP10.16□□□□□ -0.78
CUX1-207ENST00000465461 MS4A3Q96HJ5 214 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 RADILQ96JH8 1075 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 GPX7Q96SL4 187 aaPredicted RBP10.16□□□□□ -0.78
CUX1-207ENST00000465461 FEVQ99581 238 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 IFT27Q9BW83 186 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 RERGLQ9H628 205 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 NTN4Q9HB63 628 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 ST6GALNAC2Q9UJ37 374 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 UGT2A1Q9Y4X1 527 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 ABCA12Q86UK0 2595 aa10.16□□□□□ -0.78
CUX1-207ENST00000465461 A0A1W2PPL8 197 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 SLC22A23A1A5C7 686 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 A6NIZ1 184 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 ATP6V1G2-DDX39BF2Z307 99 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 XKRYO14609 159 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 E2F6O75461 281 aa10.15□□□□□ -0.78
CUX1-207ENST00000465461 ATE1O95260 518 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms