RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 USP43Q70EL4 1123 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 GPALPP1Q8IXQ4 340 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 ACBD7Q8N6N7 88 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 OR5M9Q8NGP3 310 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 OTULINQ96BN8 352 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 DTNBP1Q96EV8 351 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 MRGPRX4Q96LA9 322 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 OPALINQ96PE5 141 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 OR5M11Q96RB7 305 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 ASPNQ9BXN1 380 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 SIAEQ9HAT2 523 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 NDUFB11Q9NX14 153 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 CORINQ9Y5Q5 1042 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 IER3IP1Q9Y5U9 82 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 LIPGQ9Y5X9 500 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 EXPH5Q8NEV8 1989 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 A0A087WZY1 265 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 A6NNC1 897 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 NPIPA2E9PIF3 369 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 NPIPA3F8WFD2 350 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 CLPXO76031 633 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 SLC2A10O95528 541 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 BGLAPP02818 100 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 RAF1P04049 648 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 PRKCAP17252 672 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 SLC2A5P22732 501 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 GADD45AP24522 165 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 PSMA1P25786 263 aaKnown RBP12.35□□□□□ -0.43
HDAC6-215ENST00000465457 SDHAP31040 664 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 EIF1P41567 113 aaKnown RBP12.35□□□□□ -0.43
HDAC6-215ENST00000465457 ETV1P50549 477 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 SLC25A1P53007 311 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 RPS7P62081 194 aaKnown RBP12.35□□□□□ -0.43
HDAC6-215ENST00000465457 GGTLC2Q14390 218 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 SPCS2Q15005 226 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 SGCBQ16585 318 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 TSTQ16762 297 aaKnown RBP12.35□□□□□ -0.43
HDAC6-215ENST00000465457 C1orf140Q5VVS0 124 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 C16orf47Q6ZP98 133 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-215ENST00000465457 MDGA2Q7Z553 956 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 JAZF1Q86VZ6 243 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 RPS19BP1Q86WX3 136 aaKnown RBP12.35□□□□□ -0.43
HDAC6-215ENST00000465457 OR52E2Q8NGJ4 325 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 ASB15Q8WXK1 588 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 DDIT4LQ96D03 193 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 ZHX1-C8orf76Q96EF9 292 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 KTI12Q96EK9 354 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-215ENST00000465457 SNX18Q96RF0 628 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 COQ7Q99807 217 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 DEFB127Q9H1M4 99 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 PTGES2Q9H7Z7 377 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 SERINC1Q9NRX5 453 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 TAS2R16Q9NYV7 291 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 CAB39Q9Y376 341 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-215ENST00000465457 A3GALT2U3KPV4 340 aa12.35□□□□□ -0.43
HDAC6-215ENST00000465457 CHD3Q12873 2000 aaKnown RBP12.34□□□□□ -0.43
HDAC6-215ENST00000465457 A0A0G2JMM0 328 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 A0A1W2PPB8 328 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 A0A1W2PRS3 328 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 FAM183AA6NL82 134 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 KIR3DP1A8MWS1 328 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 INAFM1C9JVW0 142 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 J3QRE1 110 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 ZNF354AO60765 605 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-215ENST00000465457 TRIM3O75382 744 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-215ENST00000465457 LIMS3P0CW19 117 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 LIMS4P0CW20 117 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 GLI4P10075 376 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 CPEP16870 476 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 ZNF182P17025 639 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-215ENST00000465457 KIR2DL3P43628 341 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 CYB561P49447 251 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 AQP6Q13520 282 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 TPBGQ13641 420 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 PON3Q15166 354 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 TOMM34Q15785 309 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-215ENST00000465457 KLHL12Q53G59 568 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 ZNF362Q5T0B9 420 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-215ENST00000465457 ADCK1Q86TW2 530 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 ADGRG3Q86Y34 549 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 EGFL6Q8IUX8 553 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 LRRC17Q8N6Y2 441 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 SCAIQ8N9R8 606 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 LRRC75AQ8NAA5 344 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 BBS1Q8NFJ9 593 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 OR10G3Q8NGC4 313 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 OR5J2Q8NH18 312 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 SLC25A43Q8WUT9 341 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-215ENST00000465457 UFD1Q92890 307 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 PTP4A1Q93096 173 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 KISS1RQ969F8 398 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-215ENST00000465457 TAAR8Q969N4 342 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 ZBTB8AQ96BR9 441 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 SGCZQ96LD1 299 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 MOGAT1Q96PD6 335 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 TEAD3Q99594 435 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 TTYH2Q9BSA4 534 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 KATNB1Q9BVA0 655 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 POTEKPQ9BYX7 375 aa12.34□□□□□ -0.43
HDAC6-215ENST00000465457 DEPPQ9NTK1 212 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms