RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TRAF3IP2O43734 574 aaPredicted RBP15.39■□□□□ 0.05
CPSF4-209ENST00000465132 SMNDC1O75940 238 aaKnown RBP eCLIP15.39■□□□□ 0.05
CPSF4-209ENST00000465132 PCYT1AP49585 367 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 BIDP55957 195 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 TGFBR3Q03167 851 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 FAM27E3Q08E93 113 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 ACKR1Q16570 336 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 KDM4DQ6B0I6 523 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 SLC27A4Q6P1M0 643 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 NIPAL3Q6P499 406 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 KLHL17Q6TDP4 642 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 UBE2J2Q8N2K1 259 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 GPR137CQ8N3F9 429 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 OR6N1Q8NGY5 312 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 MOSPD2Q8NHP6 518 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 STARD4Q96DR4 205 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 ZNF570Q96NI8 536 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 RDH12Q96NR8 316 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 RBP7Q96R05 134 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 NIPSNAP1Q9BPW8 284 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 KATNB1Q9BVA0 655 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 LINC00470Q9BZP3 86 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 SLCO5A1Q9H2Y9 848 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 ELOVL5Q9NYP7 299 aa15.39■□□□□ 0.05
CPSF4-209ENST00000465132 SLC35F4A4IF30 521 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 M0R3G1 203 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 ARHGEF9O43307 516 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 RAMP1O60894 148 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 IFNGP01579 166 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 HMGN1P05114 100 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 SDHAP31040 664 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 CLRN1P58418 232 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 PPP2R2BQ00005 443 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 P2RY6Q15077 328 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 STK11Q15831 433 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 C1QTNF12Q5T7M4 302 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 FBXW9Q5XUX1 488 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 CLEC9AQ6UXN8 241 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 JAZF1Q86VZ6 243 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 MEX3DQ86XN8 651 aaKnown RBP15.38■□□□□ 0.05
CPSF4-209ENST00000465132 CBR4Q8N4T8 237 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 ARIH2OSQ8N7S6 290 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 MAGEE2Q8TD90 523 aaPredicted RBP15.38■□□□□ 0.05
CPSF4-209ENST00000465132 SAMD8Q96LT4 415 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 WFIKKN1Q96NZ8 548 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 GPA33Q99795 319 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 ALG12Q9BV10 488 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 HDHD5Q9BXW7 423 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 RASSF4Q9H2L5 321 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 C12orf49Q9H741 205 aa15.38■□□□□ 0.05
CPSF4-209ENST00000465132 ING1Q9UK53 422 aaPredicted RBP15.38■□□□□ 0.05
CPSF4-209ENST00000465132 DEFB108AA8MXU0 73 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 CASQ2O14958 399 aaPredicted RBP15.37■□□□□ 0.05
CPSF4-209ENST00000465132 SIAH2O43255 324 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 TXNDC12O95881 172 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 ALPLP05186 524 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 POU1F1P28069 291 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 ACVR1BP36896 505 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 CD79BP40259 229 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 GUCA1AP43080 201 aaPredicted RBP15.37■□□□□ 0.05
CPSF4-209ENST00000465132 CSNK1A1P48729 337 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 DAPP51397 102 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 SLC36A3Q495N2 470 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 Q5PR19 223 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 VWA1Q6PCB0 445 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 DNM1P34Q6PK57 102 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 Q6ZT83 130 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 SSX8Q7RTT4 187 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 HS3ST5Q8IZT8 346 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 ZIC4Q8N9L1 334 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 LRRC75AQ8NAA5 344 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 ZNF775Q96BV0 537 aaPredicted RBP15.37■□□□□ 0.05
CPSF4-209ENST00000465132 PLEKHA8Q96JA3 519 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 ERMAPQ96PL5 475 aaPredicted RBP15.37■□□□□ 0.05
CPSF4-209ENST00000465132 ZNF385AQ96PM9 386 aaKnown RBP15.37■□□□□ 0.05
CPSF4-209ENST00000465132 SLC38A2Q96QD8 506 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 TSSK6Q9BXA6 273 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 ASB6Q9NWX5 421 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 KLHL21Q9UJP4 597 aa15.37■□□□□ 0.05
CPSF4-209ENST00000465132 ZNF587BE7ETH6 402 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 PDLIM1O00151 329 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 EI24O14681 340 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 SMPD2O60906 423 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 ZNF432O94892 652 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 RENP00797 406 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 HEXAP06865 529 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 HLA-DOBP13765 273 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 ACADSP16219 412 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 CRISP1P54107 249 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 SH3BGRP55822 239 aaPredicted RBP15.36■□□□□ 0.05
CPSF4-209ENST00000465132 ERVK-25P63136 954 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 MYBPC1Q00872 1141 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 TOP3AQ13472 1001 aaPredicted RBP15.36■□□□□ 0.05
CPSF4-209ENST00000465132 FHL1Q13642 323 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 THEM4Q5T1C6 240 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 ZNF474Q6S9Z5 364 aaPredicted RBP15.36■□□□□ 0.05
CPSF4-209ENST00000465132 NUFIP2Q7Z417 695 aaKnown RBP15.36■□□□□ 0.05
CPSF4-209ENST00000465132 BTLAQ7Z6A9 289 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 LRRC75A-AS1Q8N1F1 130 aa15.36■□□□□ 0.05
CPSF4-209ENST00000465132 LNX2Q8N448 690 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms