RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 PIGFQ07326 219 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 TNK1Q13470 666 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 HIST3H3Q16695 136 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 ANKDD1AQ495B1 522 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 C16orf89Q6UX73 402 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 MBOAT2Q6ZWT7 520 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 MYPOPQ86VE0 399 aaPredicted RBP14.09□□□□□ -0.15
COL1A1-202ENST00000463440 SLC22A24Q8N4F4 322 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 RBM15BQ8NDT2 890 aaKnown RBP14.09□□□□□ -0.15
COL1A1-202ENST00000463440 NUP37Q8NFH4 326 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 FBXO17Q96EF6 278 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 ZNF347Q96SE7 839 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 CDRT15Q96T59 188 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 SEPHS2Q99611 448 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 MRPL13Q9BYD1 178 aaKnown RBP14.09□□□□□ -0.15
COL1A1-202ENST00000463440 TXNIPQ9H3M7 391 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 GORASP2Q9H8Y8 452 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 NMNAT1Q9HAN9 279 aaPredicted RBP14.09□□□□□ -0.15
COL1A1-202ENST00000463440 TMEM38BQ9NVV0 291 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 MAGEL2Q9UJ55 1249 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 VPS13CQ709C8 3753 aa14.08□□□□□ -0.15
COL1A1-202ENST00000463440 A0A087WUU8 490 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 EFCAB9A8MZ26 197 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 SSX4O60224 188 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 TRMUO75648 421 aaKnown RBP14.08□□□□□ -0.16
COL1A1-202ENST00000463440 H1F0P07305 194 aaKnown RBP14.08□□□□□ -0.16
COL1A1-202ENST00000463440 RHCEP18577 417 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 FUT4P22083 530 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 GIPRP48546 466 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 SLC9A3P48764 834 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 SNRPD2P62316 118 aaKnown RBP14.08□□□□□ -0.16
COL1A1-202ENST00000463440 RAB1AP62820 205 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 MYBPC1Q00872 1141 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 RUNX1T1Q06455 604 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 ARMC4Q5T2S8 1044 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 GKAP1Q5VSY0 366 aaPredicted RBP14.08□□□□□ -0.16
COL1A1-202ENST00000463440 VHLLQ6RSH7 139 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 DPPA2Q7Z7J5 298 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 OAFQ86UD1 273 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 SKA3Q8IX90 412 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 SYT14Q8NB59 555 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 FAM156AQ8NDB6 213 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 MCHR2Q969V1 340 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 ZNF224Q9NZL3 707 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 NDUFAF4Q9P032 175 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 TMEM5Q9Y2B1 443 aa14.08□□□□□ -0.16
COL1A1-202ENST00000463440 SETD2Q9BYW2 2564 aaPredicted RBP14.08□□□□□ -0.16
COL1A1-202ENST00000463440 TRAV27A0A087WT01 109 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 A0A1W2PRQ8 180 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 B9A039 149 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 HEXAP06865 529 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 OR4A8P0C604 315 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 ZNF14P17017 642 aaPredicted RBP14.07□□□□□ -0.16
COL1A1-202ENST00000463440 ITGA2P17301 1181 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 DSCR9P59020 149 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 CTXN1P60606 82 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 RPL27P61353 136 aaKnown RBP14.07□□□□□ -0.16
COL1A1-202ENST00000463440 HGFACQ04756 655 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 TOP3AQ13472 1001 aaPredicted RBP14.07□□□□□ -0.16
COL1A1-202ENST00000463440 DGCR6Q14129 220 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 KRT72Q14CN4 511 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 ADIPOQQ15848 244 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 FXNQ16595 210 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 SWI5Q1ZZU3 235 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 MST1LQ2TV78 715 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 SPATS1Q496A3 300 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 NRN1LQ496H8 165 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 FAM205BPQ63HN1 556 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 TBPL2Q6SJ96 375 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 TSEN54Q7Z6J9 526 aaKnown RBP14.07□□□□□ -0.16
COL1A1-202ENST00000463440 MEX3DQ86XN8 651 aaKnown RBP14.07□□□□□ -0.16
COL1A1-202ENST00000463440 DEFB107AQ8IZN7 70 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 OR51A7Q8NH64 312 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 MS4A3Q96HJ5 214 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 NSMCE2Q96MF7 247 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 RHNO1Q9BSD3 238 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 NDEL1Q9GZM8 345 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 ZNF442Q9H7R0 627 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 NOX3Q9HBY0 568 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 CD300AQ9UGN4 299 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 FBXO9Q9UK97 447 aaPredicted RBP14.07□□□□□ -0.16
COL1A1-202ENST00000463440 SPEF1Q9Y4P9 236 aa14.07□□□□□ -0.16
COL1A1-202ENST00000463440 hCG_2039718K7EN88 272 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 MGRN1O60291 552 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 LY6G6DO95868 133 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 FAM107AO95990 144 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 IGHMP01871 453 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 ZNF133P52736 654 aaPredicted RBP14.06□□□□□ -0.16
COL1A1-202ENST00000463440 CD47Q08722 323 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 DAG1Q14118 895 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 EFNB3Q15768 340 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 SLC36A2Q495M3 483 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 FGD3Q5JSP0 725 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 C10orf128Q5T292 105 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 TMEM53Q6P2H8 277 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 PODNL1Q6PEZ8 512 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 CLEC2AQ6UVW9 174 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 DNM1P46Q6ZS02 220 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 TMPRSS11FQ6ZWK6 438 aa14.06□□□□□ -0.16
COL1A1-202ENST00000463440 SLC16A14Q7RTX9 510 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms