RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 MSX2P35548 267 aaPredicted RBP19.22■□□□□ 0.67
PDLIM7-206ENST00000463411 CSNK1A1P48729 337 aa19.22■□□□□ 0.67
PDLIM7-206ENST00000463411 HGFACQ04756 655 aa19.22■□□□□ 0.67
PDLIM7-206ENST00000463411 ZNF74Q16587 644 aa19.22■□□□□ 0.67
PDLIM7-206ENST00000463411 CHRFAM7AQ494W8 412 aa19.22■□□□□ 0.67
PDLIM7-206ENST00000463411 DHFR2Q86XF0 187 aa19.22■□□□□ 0.67
PDLIM7-206ENST00000463411 TAMM41Q96BW9 452 aa19.22■□□□□ 0.67
PDLIM7-206ENST00000463411 CCDC124Q96CT7 223 aaKnown RBP19.22■□□□□ 0.67
PDLIM7-206ENST00000463411 NSMCE2Q96MF7 247 aa19.22■□□□□ 0.67
PDLIM7-206ENST00000463411 SLC19A3Q9BZV2 496 aa19.22■□□□□ 0.67
PDLIM7-206ENST00000463411 RAB1BQ9H0U4 201 aa19.22■□□□□ 0.67
PDLIM7-206ENST00000463411 NANSQ9NR45 359 aa19.22■□□□□ 0.67
PDLIM7-206ENST00000463411 hCG_2039718K7EN88 272 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 KPNA4O00629 521 aaPredicted RBP19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 STAMBPO95630 424 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 CH25HO95992 272 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 HLA-HP01893 362 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 HIST1H2ABP04908 130 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 IFNGR1P15260 489 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 B4GALT1P15291 398 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 NCK1P16333 377 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 THBS4P35443 961 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 BIDP55957 195 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 SNTB2Q13425 540 aaKnown RBP19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 DAG1Q14118 895 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 CYB5R2Q6BCY4 276 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 WDR88Q6ZMY6 472 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 CBLL1Q75N03 491 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 HIST3H2AQ7L7L0 130 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 ZNF627Q7L945 461 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 RBM45Q8IUH3 476 aaKnown RBP19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 HIST1H2ACQ93077 130 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 FAM162AQ96A26 154 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 FOXB1Q99853 325 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 TRIM15Q9C019 465 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 DCAF13Q9NV06 445 aaKnown RBP19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 RPS6KA6Q9UK32 745 aa19.21■□□□□ 0.67
PDLIM7-206ENST00000463411 LOC390937A0A1W2PQ73 354 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 RNF13O43567 381 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 ENTPD5O75356 428 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 RAB36O95755 333 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 UMPSP11172 480 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 SELENOWP63302 87 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 LSM11P83369 360 aaKnown RBP eCLIP19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 GGTLC2Q14390 218 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 LRRC23Q53EV4 343 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 CYBRD1Q53TN4 286 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 PODNL1Q6PEZ8 512 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 SLC35D2Q76EJ3 337 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 OR4D11Q8NGI4 311 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 KCNK17Q96T54 332 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 DENND2DQ9H6A0 471 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 NOX3Q9HBY0 568 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 DYNLRB1Q9NP97 96 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 ZNF229Q9UJW7 825 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 CDC42EP3Q9UKI2 254 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 FBXL3Q9UKT7 428 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 BAG5Q9UL15 447 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 SAMD4AQ9UPU9 718 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 SPEF1Q9Y4P9 236 aa19.2■□□□□ 0.66
PDLIM7-206ENST00000463411 AQP12BA6NM10 295 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 CIB2O75838 187 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 UBL3O95164 117 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 ZNF16P17020 682 aaPredicted RBP19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 ATP6V1B2P21281 511 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 ZP4Q12836 540 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 FLOT2Q14254 428 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 KRT80Q6KB66 452 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 NHLRC1Q6VVB1 395 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 NANOGNBQ7Z5D8 188 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 AQP12AQ8IXF9 295 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 SVOPLQ8N434 492 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 ZNF540Q8NDQ6 660 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 OR6X1Q8NH79 312 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 ZNF566Q969W8 418 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 MDFIQ99750 246 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 B3GNT2Q9NY97 397 aa19.19■□□□□ 0.66
PDLIM7-206ENST00000463411 VWC2LB2RUY7 222 aa19.18■□□□□ 0.66
PDLIM7-206ENST00000463411 LYPD3O95274 346 aa19.18■□□□□ 0.66
PDLIM7-206ENST00000463411 SERPINA1P01009 418 aa19.18■□□□□ 0.66
PDLIM7-206ENST00000463411 THY1P04216 161 aa19.18■□□□□ 0.66
PDLIM7-206ENST00000463411 NR4A2P43354 598 aa19.18■□□□□ 0.66
PDLIM7-206ENST00000463411 PTDSS1P48651 473 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-206ENST00000463411 GZMKP49863 264 aa19.18■□□□□ 0.66
PDLIM7-206ENST00000463411 PIGFQ07326 219 aa19.18■□□□□ 0.66
PDLIM7-206ENST00000463411 NEU4Q8WWR8 484 aaPredicted RBP19.18■□□□□ 0.66
PDLIM7-206ENST00000463411 LZICQ8WZA0 190 aa19.18■□□□□ 0.66
PDLIM7-206ENST00000463411 ZNF426Q9BUY5 554 aa19.18■□□□□ 0.66
PDLIM7-206ENST00000463411 TMEM160Q9NX00 188 aa19.18■□□□□ 0.66
PDLIM7-206ENST00000463411 SH3GLB1Q9Y371 365 aa19.18■□□□□ 0.66
PDLIM7-206ENST00000463411 CMAHPQ9Y471 501 aa19.18■□□□□ 0.66
PDLIM7-206ENST00000463411 YLPM1P49750 1951 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-206ENST00000463411 TCRBV5S2A0A599 114 aa19.17■□□□□ 0.66
PDLIM7-206ENST00000463411 IGHV4-31P0DP07 118 aa19.17■□□□□ 0.66
PDLIM7-206ENST00000463411 ZNF14P17017 642 aaPredicted RBP19.17■□□□□ 0.66
PDLIM7-206ENST00000463411 TAS2R41P59536 307 aa19.17■□□□□ 0.66
PDLIM7-206ENST00000463411 GALK2Q01415 458 aa19.17■□□□□ 0.66
PDLIM7-206ENST00000463411 MELKQ14680 651 aa19.17■□□□□ 0.66
PDLIM7-206ENST00000463411 IQCCQ4KMZ1 466 aa19.17■□□□□ 0.66
PDLIM7-206ENST00000463411 ZNF771Q7L3S4 317 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms