RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SKA3Q8IX90 412 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 ZNF786Q8N393 782 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 SVOPLQ8N434 492 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 SLC22A24Q8N4F4 322 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 ANKS4BQ8N8V4 417 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 PCYOX1LQ8NBM8 494 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 C10orf82Q8WW14 230 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 HIST1H2ACQ93077 130 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 ZNF566Q969W8 418 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 MRPL24Q96A35 216 aaKnown RBP7.9□□□□□ -1.14
BRCA1-207ENST00000461798 MRPL13Q9BYD1 178 aaKnown RBP7.9□□□□□ -1.14
BRCA1-207ENST00000461798 CCDC134Q9H6E4 229 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 FGFR1OP2Q9NVK5 253 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 TMEM38BQ9NVV0 291 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 GID8Q9NWU2 228 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 RIMS3Q9UJD0 308 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 CDC42EP3Q9UKI2 254 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 SH3GLB1Q9Y371 365 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 SPEF1Q9Y4P9 236 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 CHD3Q12873 2000 aaKnown RBP7.9□□□□□ -1.15
BRCA1-207ENST00000461798 IGHV4-61A0A0C4DH41 118 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 LOC100653049A0A140TA62 436 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 NPIPB13A6NJU9 1138 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 NPIPB4C9JG80 1138 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 MRASO14807 208 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 SERPINI2O75830 405 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 KRT34O76011 436 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 OR7A10O76100 309 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 RAB36O95755 333 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 BCL10O95999 233 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 ERCC1P07992 297 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-207ENST00000461798 OR8G3PP0DMU2 310 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 CD79AP11912 226 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 ZNF23P17027 643 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 UGT2B15P54855 530 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 SELENOWP63302 87 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 PIN1Q13526 163 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-207ENST00000461798 MSMPQ1L6U9 139 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 MMEL1Q495T6 779 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 CYBRD1Q53TN4 286 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 REP15Q6BDI9 236 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 NANOGNBQ7Z5D8 188 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 ZNF584Q8IVC4 421 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 NKAIN4Q8IVV8 208 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 FGFBP3Q8TAT2 258 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 TMEM239Q8WW34 195 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 C1orf159Q96HA4 380 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 MS4A5Q9H3V2 200 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 LPAR3Q9UBY5 353 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 AP3M1Q9Y2T2 418 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 DNHD1Q96M86 4753 aa7.89□□□□□ -1.15
BRCA1-207ENST00000461798 FBN1P35555 2871 aaKnown RBP7.88□□□□□ -1.15
BRCA1-207ENST00000461798 FAM220BPB1ANY3 271 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 BLOC1S5-TXNDC5H3BN57 136 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 KPNA4O00629 521 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-207ENST00000461798 SYNGR3O43761 229 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 LMX1BO60663 402 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 IGHG1P01857 330 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 ADRA2AP08913 450 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 QDPRP09417 244 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 TACSTD2P09758 323 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 APEHP13798 732 aaKnown RBP7.88□□□□□ -1.15
BRCA1-207ENST00000461798 DAOP14920 347 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 PTDSS1P48651 473 aaKnown RBP7.88□□□□□ -1.15
BRCA1-207ENST00000461798 MMP16P51512 607 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 TAS2R41P59536 307 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 RPS23P62266 143 aaKnown RBP7.88□□□□□ -1.15
BRCA1-207ENST00000461798 RUNX1T1Q06455 604 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 RPL18Q07020 188 aaKnown RBP7.88□□□□□ -1.15
BRCA1-207ENST00000461798 RIN1Q13671 783 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 GGTLC2Q14390 218 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 RAB39AQ14964 217 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 C10orf128Q5T292 105 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 ARMC4Q5T2S8 1044 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 KRT80Q6KB66 452 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 HDDC2Q7Z4H3 204 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 CDK20Q8IZL9 346 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 ZCCHC24Q8N2G6 241 aaKnown RBP7.88□□□□□ -1.15
BRCA1-207ENST00000461798 OR2T12Q8NG77 320 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 RP9Q8TA86 221 aaKnown RBP7.88□□□□□ -1.15
BRCA1-207ENST00000461798 UBASH3BQ8TF42 649 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 ASB10Q8WXI3 467 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 MCHR2Q969V1 340 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 NMD3Q96D46 503 aaKnown RBP7.88□□□□□ -1.15
BRCA1-207ENST00000461798 MSI2Q96DH6 328 aaKnown RBP7.88□□□□□ -1.15
BRCA1-207ENST00000461798 SGTBQ96EQ0 304 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 BEX2Q9BXY8 128 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 MRPL37Q9BZE1 423 aaKnown RBP7.88□□□□□ -1.15
BRCA1-207ENST00000461798 BPESC1Q9GZL8 116 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 C1orf198Q9H425 327 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 SMURF2Q9HAU4 748 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 C20orf141Q9NUB4 165 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 ZNF446Q9NWS9 450 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 STX18Q9P2W9 335 aaKnown RBP7.88□□□□□ -1.15
BRCA1-207ENST00000461798 REV1Q9UBZ9 1251 aa7.88□□□□□ -1.15
BRCA1-207ENST00000461798 YLPM1P49750 1951 aaKnown RBP7.88□□□□□ -1.15
BRCA1-207ENST00000461798 RTTNQ86VV8 2226 aa7.87□□□□□ -1.15
BRCA1-207ENST00000461798 LOC100289279A0A1B0GTE1 492 aa7.87□□□□□ -1.15
BRCA1-207ENST00000461798 A0A1W2PRG6 482 aa7.87□□□□□ -1.15
BRCA1-207ENST00000461798 SLC22A23A1A5C7 686 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms