RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 C18orf63Q68DL7 685 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 RHBDD2Q6NTF9 364 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 BHLHB9Q6PI77 547 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF66Q6ZN08 573 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 CUZD1Q86UP6 607 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 CA13Q8N1Q1 262 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 C1orf52Q8N6N3 182 aaKnown RBP4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF781Q8N8C0 355 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 L3MBTL4Q8NA19 623 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 POMGNT2Q8NAT1 580 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 CAMKVQ8NCB2 501 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 OR6Q1Q8NGQ2 317 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 OR51Q1Q8NH59 317 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 RHOXF1Q8NHV9 184 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 NT5CQ8TCD5 201 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 SELENOMQ8WWX9 145 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 TMIGD2Q96BF3 282 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 SMIM10Q96HG1 83 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 ST6GAL2Q96JF0 529 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 MARK4Q96L34 752 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 NSMCE2Q96MF7 247 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 RNF145Q96MT1 663 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 OR5M11Q96RB7 305 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF382Q96SR6 550 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 MAPKAP1Q9BPZ7 522 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 THTPAQ9BU02 230 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 EFCAB11Q9BUY7 163 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 MND1Q9BWT6 205 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 PINK1Q9BXM7 581 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 ACPTQ9BZG2 426 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 CHRNA10Q9GZZ6 450 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 SHARPINQ9H0F6 387 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 ACTL8Q9H568 366 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 OLAHQ9NV23 265 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 ADPRHL2Q9NX46 363 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 TEX10Q9NXF1 929 aaPredicted RBP4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 BTNL2Q9UIR0 455 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 PADI1Q9ULC6 663 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 MGAT4BQ9UQ53 548 aa4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 PTRH2Q9Y3E5 179 aaKnown RBP4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 LSM4Q9Y4Z0 139 aaKnown RBP4.34□□□□□ -1.71
ATPAF1-203ENST00000460928 SPG11Q96JI7 2443 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 A0A1B0GX78 115 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 I3L521 148 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 K7EM74 188 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 PHYHO14832 338 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 AZIN1O14977 448 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 PGRMC2O15173 223 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC31A2O15432 143 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 GALR3O60755 368 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 LDB3O75112 727 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 UGT2B11O75310 529 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 CRCPO75575 148 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC22A5O76082 557 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 LRATO95237 230 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 HSPA4LO95757 839 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 OTCP00480 354 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 IFNA2P01563 188 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 IFNGP01579 166 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 C1QBP02746 253 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 SERPINE1P05121 402 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 KLK1P06870 262 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 CD63P08962 238 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC35G6P0C7Q6 338 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 NHLRC4P0CG21 123 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 C8orf89P0DMQ9 161 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 LIPCP11150 499 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 SPI1P17947 270 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 MAOAP21397 527 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 ATP5A1P25705 553 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 AHRP35869 848 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC1A3P43003 542 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 SSR2P43308 183 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 XCR1P46094 333 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC1A6P48664 564 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 HLCSP50747 726 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 NME5P56597 212 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 ABCE1P61221 599 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 SCARB2Q14108 478 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 LY6DQ14210 128 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 SMCO1Q147U7 214 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 DEFB109BQ30KR1 87 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 ADPRMQ3LIE5 342 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 RNF212Q495C1 297 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 ARMCX4Q5H9R4 360 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 PAGE2BQ5JRK9 111 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 CXorf66Q5JRM2 361 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 DDI2Q5TDH0 399 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 KHDRBS2Q5VWX1 349 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 LIPJQ5W064 366 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 HIST2H2AA3Q6FI13 130 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 PAPD4Q6PIY7 484 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF517Q6ZMY9 492 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 C16orf47Q6ZP98 133 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 DGAT2L6Q6ZPD8 337 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 Q6ZSR9 355 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 PGAP1Q75T13 922 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 FAM122BQ7Z309 247 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 GALNT10Q86SR1 603 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 DDIASQ8IXT1 998 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms