RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 LYPD8Q6UX82 237 aa12.72□□□□□ -0.37
ERCC3-205ENST00000460485 UNQ9370/PRO34162Q6UXP9 181 aa12.72□□□□□ -0.37
ERCC3-205ENST00000460485 ARMC10Q8N2F6 343 aa12.72□□□□□ -0.37
ERCC3-205ENST00000460485 FAM83FQ8NEG4 500 aaPredicted RBP12.72□□□□□ -0.37
ERCC3-205ENST00000460485 ZBTB8AQ96BR9 441 aa12.72□□□□□ -0.37
ERCC3-205ENST00000460485 TXNDC15Q96J42 360 aa12.72□□□□□ -0.37
ERCC3-205ENST00000460485 FRMD6Q96NE9 622 aa12.72□□□□□ -0.37
ERCC3-205ENST00000460485 RNF32Q9H0A6 362 aa12.72□□□□□ -0.37
ERCC3-205ENST00000460485 COMMD4Q9H0A8 199 aa12.72□□□□□ -0.37
ERCC3-205ENST00000460485 SLITRK2Q9H156 845 aa12.72□□□□□ -0.37
ERCC3-205ENST00000460485 ZCCHC4Q9H5U6 513 aa12.72□□□□□ -0.37
ERCC3-205ENST00000460485 SIRT4Q9Y6E7 314 aaPredicted RBP12.72□□□□□ -0.37
ERCC3-205ENST00000460485 HECTD1Q9ULT8 2610 aa12.72□□□□□ -0.37
ERCC3-205ENST00000460485 PCNX3Q9H6A9 2034 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 IGHV1-45A0A0A0MS14 117 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 IGHV3-20A0A0C4DH32 117 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 TMEM200CA6NKL6 621 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 TMEM212A6NML5 194 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 F13BP05160 661 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 ICAM2P13598 275 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 ACVR1BP36896 505 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 FOLR3P41439 243 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 GLO1Q04760 184 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 SELENBP1Q13228 472 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 DNASE1L3Q13609 305 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 ACKR1Q16570 336 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 ZNF239Q16600 458 aaKnown RBP12.71□□□□□ -0.37
ERCC3-205ENST00000460485 MZT2BQ6NZ67 158 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 CNIH2Q6PI25 160 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 H1FNTQ75WM6 255 aaPredicted RBP12.71□□□□□ -0.37
ERCC3-205ENST00000460485 SSX6Q7RTT6 188 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 OTOSQ8NHW6 89 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 MR1Q95460 341 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 ADAD1Q96M93 576 aaKnown RBP12.71□□□□□ -0.37
ERCC3-205ENST00000460485 APMAPQ9HDC9 416 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 CHST11Q9NPF2 352 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 ACOXLQ9NUZ1 547 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 COMMD3Q9UBI1 195 aa12.71□□□□□ -0.37
ERCC3-205ENST00000460485 E9PI62 339 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 NPIPA5E9PKD4 350 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 ERVH48-1M5A8F1 160 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 ARHGEF9O43307 516 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 SERPINI2O75830 405 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 HRGP04196 525 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 RAB40ALP0C0E4 278 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 TRAPPC2P0DI81 140 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 TRAPPC2BP0DI82 140 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 ATXN8OSP0DMR3 200 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 ALOX5APP20292 161 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 NPR2P20594 1047 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 RANBP1P43487 201 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 CCR9P51686 369 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 PITPNAQ00169 270 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 ALKBH1Q13686 389 aaKnown RBP12.7□□□□□ -0.38
ERCC3-205ENST00000460485 PLPPR5Q32ZL2 321 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 GXYLT1Q4G148 440 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 PYDC2Q56P42 97 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 DCAF12Q5T6F0 453 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 SLC18B1Q6NT16 456 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 PCSK4Q6UW60 755 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 LRRN1Q6UXK5 716 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 C19orf18Q8NEA5 215 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 ZNF417Q8TAU3 575 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 ZPLD1Q8TCW7 415 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 C15orf40Q8WUR7 153 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 SLC25A36Q96CQ1 311 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 ZC3HAV1LQ96H79 300 aaKnown RBP12.7□□□□□ -0.38
ERCC3-205ENST00000460485 IMMP1LQ96LU5 166 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 RASL10BQ96S79 203 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 DCLRE1CQ96SD1 692 aaKnown RBP12.7□□□□□ -0.38
ERCC3-205ENST00000460485 ZNF587Q96SQ5 575 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-205ENST00000460485 DDA1Q9BW61 102 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 ULBP3Q9BZM4 244 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 SYT4Q9H2B2 425 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 PPP1R3EQ9H7J1 279 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 CYSLTR2Q9NS75 346 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 SLC39A1Q9NY26 324 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 NPIPA1Q9UND3 350 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 COPS3Q9UNS2 423 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 B9D1Q9UPM9 204 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 HDGFL3Q9Y3E1 203 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 MGAQ8IWI9 3026 aa12.7□□□□□ -0.38
ERCC3-205ENST00000460485 SLC22A23A1A5C7 686 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 TTLL8A6PVC2 850 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 ZNF254O75437 659 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 ABHD16AO95870 558 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 PRKAR1AP10644 381 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 SLC2A2P11168 524 aaPredicted RBP12.69□□□□□ -0.38
ERCC3-205ENST00000460485 COX6A1P12074 109 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 SHC1P29353 583 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 GPR85P60893 370 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 ROM1Q03395 351 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 IL18Q14116 193 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 BTBD16Q32M84 506 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 Q499Y3 187 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 TEX30Q5JUR7 227 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 IDNKQ5T6J7 187 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 FAM69BQ5VUD6 431 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 DESI1Q6ICB0 168 aa12.69□□□□□ -0.38
ERCC3-205ENST00000460485 PYHIN1Q6K0P9 492 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms