RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ZNF530Q6P9A1 599 aaPredicted RBP2.23□□□□□ -2.05
RFC4-211ENST00000460408 ACP7Q6ZNF0 438 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 COX15Q7KZN9 410 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 ZNF571Q7Z3V5 609 aaPredicted RBP2.23□□□□□ -2.05
RFC4-211ENST00000460408 ZNF546Q86UE3 836 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 PIANPQ8IYJ0 282 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 OR6C4Q8NGE1 309 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 OR13C2Q8NGS9 318 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 OR9G1Q8NH87 305 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 ARPC1AQ92747 370 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 RDH5Q92781 318 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 FGF14Q92915 247 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 FCRL1Q96LA6 429 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 C12orf42Q96LP6 360 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 CDX2Q99626 313 aaPredicted RBP2.23□□□□□ -2.05
RFC4-211ENST00000460408 NRTNQ99748 197 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 TMEM246Q9BRR3 403 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 NAT9Q9BTE0 207 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 FAIM2Q9BWQ8 316 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 ROPN1BQ9BZX4 212 aaPredicted RBP2.23□□□□□ -2.05
RFC4-211ENST00000460408 OR11A1Q9GZK7 315 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 ANKRD19PQ9H560 264 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 AZI2Q9H6S1 392 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 NANOGQ9H9S0 305 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 LY9Q9HBG7 655 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 NMRAL1Q9HBL8 299 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 SGK2Q9HBY8 427 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 HYPKQ9NX55 129 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 GIN1Q9NXP7 522 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 QPCTLQ9NXS2 382 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 BFARQ9NZS9 450 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 TMCO1Q9UM00 188 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 TRAF3IP3Q9Y228 551 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 KCNIP3Q9Y2W7 256 aa2.23□□□□□ -2.05
RFC4-211ENST00000460408 PRG3Q9Y2Y8 225 aaPredicted RBP2.23□□□□□ -2.05
RFC4-211ENST00000460408 UBR3Q6ZT12 1888 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 E9PCH4 1651 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 CHD6Q8TD26 2715 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 PTPRZ1P23471 2315 aaPredicted RBP2.22□□□□□ -2.05
RFC4-211ENST00000460408 ACACBO00763 2458 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 KIR2DL5BA0A0G2JN68 375 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 KIR2DL5BA0A0G2JPC4 375 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 PCP4L1A6NKN8 68 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 OR5B21A6NL26 309 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 INSP01308 110 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 P04436 131 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 IGHV4-34P06331 123 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 NR2C1P13056 603 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 ETS2P15036 469 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 MGMTP16455 207 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 RCC1P18754 421 aaPredicted RBP2.22□□□□□ -2.05
RFC4-211ENST00000460408 TBPP20226 339 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 GPM6AP51674 278 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 RPL23AP62750 156 aaKnown RBP2.22□□□□□ -2.05
RFC4-211ENST00000460408 SCRN3Q0VDG4 424 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 PLD1Q13393 1074 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 ZNF77Q15935 545 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 NRF1Q16656 503 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 C6orf226Q5I0X4 101 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 PAGE3Q5JUK9 113 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 CTSL3PQ5NE16 218 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 PHYHD1Q5SRE7 291 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 IGFL2Q6UWQ7 119 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 Q6ZN92 141 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 H2BFWTQ7Z2G1 175 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 ECHDC2Q86YB7 292 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 NUDCD3Q8IVD9 361 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 MFSD6LQ8IWD5 586 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 KIR2DL5AQ8N109 375 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 KIR2DL5BQ8NHK3 375 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 FAM151AQ8WW52 585 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 ACOT11Q8WXI4 607 aaPredicted RBP2.22□□□□□ -2.05
RFC4-211ENST00000460408 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.22□□□□□ -2.05
RFC4-211ENST00000460408 ZNF641Q96N77 438 aaPredicted RBP2.22□□□□□ -2.05
RFC4-211ENST00000460408 SLC39A3Q9BRY0 314 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 RIOK2Q9BVS4 552 aaKnown RBP2.22□□□□□ -2.05
RFC4-211ENST00000460408 ACTR6Q9GZN1 396 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 PPA2Q9H2U2 334 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 SRMSQ9H3Y6 488 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 PLGRKTQ9HBL7 147 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 EML4Q9HC35 981 aaKnown RBP2.22□□□□□ -2.05
RFC4-211ENST00000460408 CCL28Q9NRJ3 127 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 COX16Q9P0S2 106 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 TP53TG5Q9Y2B4 290 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 PPLO60437 1756 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 CPSF1Q10570 1443 aaKnown RBP2.22□□□□□ -2.05
RFC4-211ENST00000460408 ANKRD50Q9ULJ7 1429 aa2.22□□□□□ -2.05
RFC4-211ENST00000460408 COL4A4P53420 1690 aaPredicted RBP2.22□□□□□ -2.05
RFC4-211ENST00000460408 KIF1BO60333 1816 aa2.21□□□□□ -2.05
RFC4-211ENST00000460408 SCN11AQ9UI33 1791 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 IGLV3-22A0A075B6J6 115 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 FAM240BA0A1B0GVZ2 78 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 RBMY1BA6NDE4 496 aaKnown RBP2.21□□□□□ -2.06
RFC4-211ENST00000460408 RBMY1EA6NEQ0 496 aaKnown RBP2.21□□□□□ -2.06
RFC4-211ENST00000460408 GJE1A6NN92 205 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 C12orf77C9JDV5 145 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 HAS3O00219 553 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 ZNF609O15014 1411 aa2.21□□□□□ -2.06
RFC4-211ENST00000460408 RBMY1DP0C7P1 496 aaKnown RBP2.21□□□□□ -2.06
RFC4-211ENST00000460408 RBMY1A1P0DJD3 496 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms