RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 SMR3AQ99954 134 aa13.74□□□□□ -0.21
SDF4-204ENST00000459994 TSSK6Q9BXA6 273 aa13.74□□□□□ -0.21
SDF4-204ENST00000459994 TOR3AQ9H497 397 aa13.74□□□□□ -0.21
SDF4-204ENST00000459994 UBTD1Q9HAC8 227 aa13.74□□□□□ -0.21
SDF4-204ENST00000459994 SLC25A19Q9HC21 320 aa13.74□□□□□ -0.21
SDF4-204ENST00000459994 GLRX2Q9NS18 164 aa13.74□□□□□ -0.21
SDF4-204ENST00000459994 TBC1D23Q9NUY8 699 aa13.74□□□□□ -0.21
SDF4-204ENST00000459994 ZNF226Q9NYT6 803 aa13.74□□□□□ -0.21
SDF4-204ENST00000459994 KLHL9Q9P2J3 617 aa13.74□□□□□ -0.21
SDF4-204ENST00000459994 BAIAP2Q9UQB8 552 aa13.74□□□□□ -0.21
SDF4-204ENST00000459994 ARID1AO14497 2285 aa13.74□□□□□ -0.21
SDF4-204ENST00000459994 SETD2Q9BYW2 2564 aaPredicted RBP13.73□□□□□ -0.21
SDF4-204ENST00000459994 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.73□□□□□ -0.21
SDF4-204ENST00000459994 ZNF724A8MTY0 619 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 MCIDASD6RGH6 385 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 C11orf98E9PRG8 122 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 GPR171O14626 319 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 TRAF3IP2O43734 574 aaPredicted RBP13.73□□□□□ -0.21
SDF4-204ENST00000459994 IDH3BO43837 385 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 TXNDC12O95881 172 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 IGHMP01871 453 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 F13BP05160 661 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 ZNF43P17038 809 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 POU1F1P28069 291 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 RPL4P36578 427 aaKnown RBP13.73□□□□□ -0.21
SDF4-204ENST00000459994 POLR2IP36954 125 aaKnown RBP13.73□□□□□ -0.21
SDF4-204ENST00000459994 CTXN1P60606 82 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 CDK5Q00535 292 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 C1DQ13901 141 aaKnown RBP13.73□□□□□ -0.21
SDF4-204ENST00000459994 SLC27A4Q6P1M0 643 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 UEVLDQ8IX04 471 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 LNX2Q8N448 690 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 OR2T33Q8NG76 320 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 MBOAT4Q96T53 435 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 TACO1Q9BSH4 297 aaKnown RBP13.73□□□□□ -0.21
SDF4-204ENST00000459994 GRIP2Q9C0E4 1043 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 ACTR6Q9GZN1 396 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 TXNIPQ9H3M7 391 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 RIBC2Q9H4K1 309 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 BCO1Q9HAY6 547 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 KLHL13Q9P2N7 655 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 PRSS50Q9UI38 385 aa13.73□□□□□ -0.21
SDF4-204ENST00000459994 A0A1W2PRG6 482 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 ZAR1LA6NP61 321 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 BHLHE40O14503 412 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 IMPA2O14732 288 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 SLC16A6O15403 523 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 HLA-DOBP13765 273 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 EPHA2P29317 976 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 GRK5P34947 590 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 RPS6KA3P51812 740 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 POU3F1Q03052 451 aaPredicted RBP13.72□□□□□ -0.21
SDF4-204ENST00000459994 GINS1Q14691 196 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 PTGES3Q15185 160 aaKnown RBP13.72□□□□□ -0.21
SDF4-204ENST00000459994 ZIK1Q3SY52 487 aaPredicted RBP13.72□□□□□ -0.21
SDF4-204ENST00000459994 SLX4IPQ5VYV7 408 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 GPR139Q6DWJ6 353 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 BEND4Q6ZU67 534 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 CREB3L2Q70SY1 520 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 SLC35D2Q76EJ3 337 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 FAM122BQ7Z309 247 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 GPAT4Q86UL3 456 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 WFDC8Q8IUA0 241 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 GABRG1Q8N1C3 465 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 ZIC4Q8N9L1 334 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 OR4Q3Q8NH05 313 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 KATNB1Q9BVA0 655 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 IFT27Q9BW83 186 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 FAM118AQ9NWS6 357 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 EMC3Q9P0I2 261 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 IL20RAQ9UHF4 553 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 FLVCR1Q9Y5Y0 555 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 MTORP42345 2549 aa13.72□□□□□ -0.21
SDF4-204ENST00000459994 NF1P21359 2839 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 PPP1R3DO95685 299 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 BCL10O95999 233 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 HMGN1P05114 100 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 YES1P07947 543 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 HSPA13P48723 471 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 DAP3P51398 398 aaKnown RBP13.71□□□□□ -0.21
SDF4-204ENST00000459994 AQP4P55087 323 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 RPL27P61353 136 aaKnown RBP13.71□□□□□ -0.21
SDF4-204ENST00000459994 ERVK-25P63136 954 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 ACKR1Q16570 336 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 PGGHGQ32M88 737 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 CLEC12AQ5QGZ9 265 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 TTC23Q5W5X9 447 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 FAM205BPQ63HN1 556 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 ALKBH2Q6NS38 261 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 IZUMO2Q6UXV1 221 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 IGFN1Q86VF2 1251 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 DHRSXQ8N5I4 330 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 ARIH2OSQ8N7S6 290 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 TMEM45BQ96B21 275 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 S100PBPQ96BU1 408 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 HRASLS5Q96KN8 279 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 ZNF570Q96NI8 536 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 PITX2Q99697 317 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 TEX12Q9BXU0 123 aa13.71□□□□□ -0.21
SDF4-204ENST00000459994 BEX4Q9NWD9 120 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms