RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 ARHGEF9O43307 516 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 ZIC3O60481 467 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 TRAPPC6AO75865 159 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 GABARAPO95166 117 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 SCG5P05408 212 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 SP1P08047 785 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 SBK2P0C263 348 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 OR2T7P0C7T2 308 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 HSMCR30P0CW71 290 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 RNF224P0DH78 156 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 IMPDH2P12268 514 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 CD36P16671 472 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 POU3F2P20265 443 aaPredicted RBP8.01□□□□□ -1.13
VPS50-207ENST00000458530 TCEA1P23193 301 aaKnown RBP8.01□□□□□ -1.13
VPS50-207ENST00000458530 GPR85P60893 370 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 HSF1Q00613 529 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 BDH1Q02338 343 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 POU3F1Q03052 451 aaPredicted RBP8.01□□□□□ -1.13
VPS50-207ENST00000458530 GALEQ14376 348 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 INPP5JQ15735 1006 aaPredicted RBP8.01□□□□□ -1.13
VPS50-207ENST00000458530 ACKR1Q16570 336 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 ZNF362Q5T0B9 420 aaPredicted RBP8.01□□□□□ -1.13
VPS50-207ENST00000458530 C1QL3Q5VWW1 255 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 TMEM225Q6GV28 225 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 SPINK14Q6IE38 97 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 ESPNLQ6ZVH7 1005 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 ASB18Q6ZVZ8 466 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 SLC35D2Q76EJ3 337 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 SLC22A16Q86VW1 577 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 ZNF227Q86WZ6 799 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 ERI1Q8IV48 349 aaKnown RBP8.01□□□□□ -1.13
VPS50-207ENST00000458530 MDS2Q8NDY4 140 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 FAM83FQ8NEG4 500 aaPredicted RBP8.01□□□□□ -1.13
VPS50-207ENST00000458530 OR10H4Q8NGA5 316 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 OR6K6Q8NGW6 343 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 OR2T27Q8NH04 317 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 ZNF519Q8TB69 540 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 SMPDL3BQ92485 455 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 UFD1Q92890 307 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 PTP4A1Q93096 173 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 KISS1RQ969F8 398 aaPredicted RBP8.01□□□□□ -1.13
VPS50-207ENST00000458530 PNPLA2Q96AD5 504 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 YIPF6Q96EC8 236 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 ADAD1Q96M93 576 aaKnown RBP8.01□□□□□ -1.13
VPS50-207ENST00000458530 OXGR1Q96P68 337 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 SIGLEC12Q96PQ1 595 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 ALG12Q9BV10 488 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 TMEM185BQ9H7F4 350 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 ZNF703Q9H7S9 590 aaPredicted RBP8.01□□□□□ -1.13
VPS50-207ENST00000458530 TRIM36Q9NQ86 728 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 RPRD1BQ9NQG5 326 aaKnown RBP8.01□□□□□ -1.13
VPS50-207ENST00000458530 PAQR5Q9NXK6 330 aaPredicted RBP8.01□□□□□ -1.13
VPS50-207ENST00000458530 ZNF346Q9UL40 294 aaKnown RBP8.01□□□□□ -1.13
VPS50-207ENST00000458530 HRH3Q9Y5N1 445 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 FKBP7Q9Y680 259 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 TMEM14AQ9Y6G1 99 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 CRYBG3Q68DQ2 2970 aa8.01□□□□□ -1.13
VPS50-207ENST00000458530 ITPR3Q14573 2671 aa8□□□□□ -1.13
VPS50-207ENST00000458530 TRAV17A0A0B4J275 112 aa8□□□□□ -1.13
VPS50-207ENST00000458530 A0A0G2JMM0 328 aa8□□□□□ -1.13
VPS50-207ENST00000458530 A0A1W2PPB8 328 aa8□□□□□ -1.13
VPS50-207ENST00000458530 A0A1W2PRS3 328 aa8□□□□□ -1.13
VPS50-207ENST00000458530 OR6C68A6NDL8 312 aa8□□□□□ -1.13
VPS50-207ENST00000458530 A6NL46 340 aa8□□□□□ -1.13
VPS50-207ENST00000458530 AQP7P3A6NL99 342 aa8□□□□□ -1.13
VPS50-207ENST00000458530 KIR3DP1A8MWS1 328 aa8□□□□□ -1.13
VPS50-207ENST00000458530 ZNF670-ZNF695F2Z2N8 137 aa8□□□□□ -1.13
VPS50-207ENST00000458530 H3BMQ9 156 aa8□□□□□ -1.13
VPS50-207ENST00000458530 NKX2-8O15522 239 aa8□□□□□ -1.13
VPS50-207ENST00000458530 AKR7A3O95154 331 aa8□□□□□ -1.13
VPS50-207ENST00000458530 PLGP00747 810 aaPredicted RBP8□□□□□ -1.13
VPS50-207ENST00000458530 MT-ND5P03915 603 aa8□□□□□ -1.13
VPS50-207ENST00000458530 HPNP05981 417 aa8□□□□□ -1.13
VPS50-207ENST00000458530 ZNF43P17038 809 aa8□□□□□ -1.13
VPS50-207ENST00000458530 PSMA1P25786 263 aaKnown RBP8□□□□□ -1.13
VPS50-207ENST00000458530 CDKN2AP42771 156 aaKnown RBP8□□□□□ -1.13
VPS50-207ENST00000458530 RGS6P49758 472 aa8□□□□□ -1.13
VPS50-207ENST00000458530 MEOX1P50221 254 aa8□□□□□ -1.13
VPS50-207ENST00000458530 ETV1P50549 477 aa8□□□□□ -1.13
VPS50-207ENST00000458530 RIPPLY3P57055 190 aa8□□□□□ -1.13
VPS50-207ENST00000458530 ACSM1Q08AH1 577 aa8□□□□□ -1.13
VPS50-207ENST00000458530 MRPL28Q13084 256 aaKnown RBP8□□□□□ -1.13
VPS50-207ENST00000458530 POU4F3Q15319 338 aa8□□□□□ -1.13
VPS50-207ENST00000458530 HYAL4Q2M3T9 481 aa8□□□□□ -1.13
VPS50-207ENST00000458530 MESTQ5EB52 335 aa8□□□□□ -1.13
VPS50-207ENST00000458530 ZNF766Q5HY98 468 aa8□□□□□ -1.13
VPS50-207ENST00000458530 ATP1A1-AS1Q5TC04 95 aa8□□□□□ -1.13
VPS50-207ENST00000458530 EEF1A1P5Q5VTE0 462 aa8□□□□□ -1.13
VPS50-207ENST00000458530 GDPGP1Q6ZNW5 385 aa8□□□□□ -1.13
VPS50-207ENST00000458530 SULF2Q8IWU5 870 aa8□□□□□ -1.13
VPS50-207ENST00000458530 SLC35F2Q8IXU6 374 aa8□□□□□ -1.13
VPS50-207ENST00000458530 KBTBD8Q8NFY9 601 aa8□□□□□ -1.13
VPS50-207ENST00000458530 OR4F15Q8NGB8 312 aa8□□□□□ -1.13
VPS50-207ENST00000458530 ASB10Q8WXI3 467 aa8□□□□□ -1.13
VPS50-207ENST00000458530 C12orf43Q96C57 262 aaKnown RBP8□□□□□ -1.13
VPS50-207ENST00000458530 NMD3Q96D46 503 aaKnown RBP8□□□□□ -1.13
VPS50-207ENST00000458530 SCMH1Q96GD3 660 aa8□□□□□ -1.13
VPS50-207ENST00000458530 ABHD17AQ96GS6 310 aa8□□□□□ -1.13
VPS50-207ENST00000458530 ALG8Q9BVK2 526 aa8□□□□□ -1.13
VPS50-207ENST00000458530 HCAR1Q9BXC0 346 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms