RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 ETFDHQ16134 617 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 MICAQ29983 383 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 RFX4Q33E94 735 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 ANKDD1AQ495B1 522 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 ADAM5Q6NVV9 412 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 ANKRD16Q6P6B7 361 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 ZNF813Q6ZN06 617 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 ZNF704Q6ZNC4 412 aaPredicted RBP10.66□□□□□ -0.7
CNOT3-205ENST00000457463 MYPOPQ86VE0 399 aaPredicted RBP10.66□□□□□ -0.7
CNOT3-205ENST00000457463 C17orf78Q8N4C9 275 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 ARIH2OSQ8N7S6 290 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 KBTBD8Q8NFY9 601 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 FANK1Q8TC84 345 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 GNPDA2Q8TDQ7 276 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 NSMAFQ92636 917 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 GTPBP3Q969Y2 492 aaKnown RBP10.66□□□□□ -0.7
CNOT3-205ENST00000457463 SAMD8Q96LT4 415 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 FOXB1Q99853 325 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 USB1Q9BQ65 265 aaKnown RBP10.66□□□□□ -0.7
CNOT3-205ENST00000457463 TMEM204Q9BSN7 226 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 PLA2G12AQ9BZM1 189 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 MMADHCQ9H3L0 296 aaPredicted RBP10.66□□□□□ -0.7
CNOT3-205ENST00000457463 EGLN3Q9H6Z9 239 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 NTN4Q9HB63 628 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 B3GAT2Q9NPZ5 323 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 NRIP3Q9NQ35 241 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 PLEKHA6Q9Y2H5 1048 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 UGT2A1Q9Y4X1 527 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 IER3IP1Q9Y5U9 82 aa10.66□□□□□ -0.7
CNOT3-205ENST00000457463 ARPC4-TTLL3A0A0A6YYG9 625 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 TEX13CA0A0J9YWL9 993 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 ABCD4O14678 606 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 ARHGEF9O43307 516 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 HLA-HP01893 362 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 TP53P04637 393 aaPredicted RBP10.65□□□□□ -0.7
CNOT3-205ENST00000457463 CD40P25942 277 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 CDAP32320 146 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 CAPZA2P47755 286 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 SH3BGRP55822 239 aaPredicted RBP10.65□□□□□ -0.7
CNOT3-205ENST00000457463 UBE2NP61088 152 aaKnown RBP10.65□□□□□ -0.7
CNOT3-205ENST00000457463 PIGFQ07326 219 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 CD47Q08722 323 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 TSPAN31Q12999 210 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 OTPQ5XKR4 325 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 SLC25A47Q6Q0C1 308 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 SMARCD3Q6STE5 483 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 KLHL17Q6TDP4 642 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 PTCHD4Q6ZW05 846 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 ZNF627Q7L945 461 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 SKA3Q8IX90 412 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 OR10G2Q8NGC3 310 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 OR8D4Q8NGM9 314 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 MAGEE2Q8TD90 523 aaPredicted RBP10.65□□□□□ -0.7
CNOT3-205ENST00000457463 ZNF570Q96NI8 536 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 FOXN4Q96NZ1 517 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 GPX7Q96SL4 187 aaPredicted RBP10.65□□□□□ -0.7
CNOT3-205ENST00000457463 SH3GL3Q99963 347 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 NIPSNAP1Q9BPW8 284 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 UBTD1Q9HAC8 227 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 KRCC1Q9NPI7 259 aaPredicted RBP10.65□□□□□ -0.7
CNOT3-205ENST00000457463 TMEM38BQ9NVV0 291 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 GRHPRQ9UBQ7 328 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 AMDHD2Q9Y303 409 aa10.65□□□□□ -0.7
CNOT3-205ENST00000457463 TEX15Q9BXT5 2789 aa10.65□□□□□ -0.71
CNOT3-205ENST00000457463 AKAP6Q13023 2319 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 SPG11Q96JI7 2443 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 IGHV1-18A0A0C4DH31 117 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 SHISA9B4DS77 424 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 SOCS2O14508 198 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 GNGT2O14610 69 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 SOX14O95416 240 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 SCG5P05408 212 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 CD3EP07766 207 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 PRKACGP22612 351 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 HOXC12P31275 282 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 IFNGR2P38484 337 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 CDKN2AP42771 156 aaKnown RBP10.64□□□□□ -0.71
CNOT3-205ENST00000457463 ZNF133P52736 654 aaPredicted RBP10.64□□□□□ -0.71
CNOT3-205ENST00000457463 KRR1Q13601 381 aaKnown RBP10.64□□□□□ -0.71
CNOT3-205ENST00000457463 TAF11Q15544 211 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 CLEC12AQ5QGZ9 265 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 C10orf128Q5T292 105 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 B3GLCTQ6Y288 498 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 DPY19L2P2Q6ZN68 376 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 ZNF620Q6ZNG0 422 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 MDP1Q86V88 176 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 PIAS4Q8N2W9 510 aaPredicted RBP10.64□□□□□ -0.71
CNOT3-205ENST00000457463 AKAP1Q92667 903 aaKnown RBP eCLIP10.64□□□□□ -0.71
CNOT3-205ENST00000457463 POP5Q969H6 163 aaKnown RBP10.64□□□□□ -0.71
CNOT3-205ENST00000457463 ALG12Q9BV10 488 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 ESRP2Q9H6T0 727 aaKnown RBP10.64□□□□□ -0.71
CNOT3-205ENST00000457463 B3GNT2Q9NY97 397 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 PDP1Q9P0J1 537 aaPredicted RBP10.64□□□□□ -0.71
CNOT3-205ENST00000457463 RNF115Q9Y4L5 304 aa10.64□□□□□ -0.71
CNOT3-205ENST00000457463 SLC22A23A1A5C7 686 aa10.63□□□□□ -0.71
CNOT3-205ENST00000457463 CENPBD1B2RD01 187 aa10.63□□□□□ -0.71
CNOT3-205ENST00000457463 CIB2O75838 187 aa10.63□□□□□ -0.71
CNOT3-205ENST00000457463 GOSR1O95249 250 aa10.63□□□□□ -0.71
CNOT3-205ENST00000457463 TXNDC12O95881 172 aa10.63□□□□□ -0.71
CNOT3-205ENST00000457463 WNT11O96014 354 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms