RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 OLIG3Q7RTU3 272 aa11.09□□□□□ -0.63
SEC16A-207ENST00000453963 PPP1R3BQ86XI6 285 aa11.09□□□□□ -0.63
SEC16A-207ENST00000453963 CALHM3Q86XJ0 350 aa11.09□□□□□ -0.63
SEC16A-207ENST00000453963 KDM8Q8N371 416 aa11.09□□□□□ -0.63
SEC16A-207ENST00000453963 CLEC1AQ8NC01 280 aa11.09□□□□□ -0.63
SEC16A-207ENST00000453963 C19orf43Q9BQ61 176 aa11.09□□□□□ -0.63
SEC16A-207ENST00000453963 VN1R3Q9BXE9 311 aa11.09□□□□□ -0.63
SEC16A-207ENST00000453963 MAST2Q6P0Q8 1798 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 BCAT2O15382 392 aaPredicted RBP11.08□□□□□ -0.64
SEC16A-207ENST00000453963 PRKRAO75569 313 aaKnown RBP11.08□□□□□ -0.64
SEC16A-207ENST00000453963 B3GALT4O96024 378 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 TNFSF4P23510 183 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 ARG2P78540 354 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 SNTB1Q13884 538 aaKnown RBP11.08□□□□□ -0.64
SEC16A-207ENST00000453963 PLGLAQ15195 96 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 ZNF385BQ569K4 471 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 PTCRAQ6ISU1 281 aaPredicted RBP11.08□□□□□ -0.64
SEC16A-207ENST00000453963 PLPP6Q8IY26 295 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 PRR18Q8N4B5 295 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 SGK3Q96BR1 496 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 CCNL2Q96S94 520 aaPredicted RBP11.08□□□□□ -0.64
SEC16A-207ENST00000453963 RHNO1Q9BSD3 238 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 ULBP2Q9BZM5 246 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.08□□□□□ -0.64
SEC16A-207ENST00000453963 RGS11O94810 467 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 NID1P14543 1247 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 ZNF44P15621 663 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 HMGA1P17096 107 aaKnown RBP11.08□□□□□ -0.64
SEC16A-207ENST00000453963 KIR2DL3P43628 341 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 P2RX3P56373 397 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 PDZK1IP1Q13113 114 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 CDKN3Q16667 212 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 RBMS3Q6XE24 437 aaKnown RBP11.08□□□□□ -0.64
SEC16A-207ENST00000453963 ESPNLQ6ZVH7 1005 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 FAM57BQ71RH2 274 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 LFNGQ8NES3 379 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 FAM174AQ8TBP5 190 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 NIPSNAP3BQ9BS92 247 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 POFUT1Q9H488 388 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 PLSCR3Q9NRY6 295 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 A0A1B0GUL6 1792 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 A0A1W2PPV4 95 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 PRAMEF27A3QJZ7 478 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 HSBP1L1C9JCN9 74 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 ADAM10O14672 748 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 SUSD5O60279 629 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 TPOP07202 933 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 ZDHHC11BP0C7U3 371 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 CD1EP15812 388 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 SPNP16150 400 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 CPT2P23786 658 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 BLVRBP30043 206 aaPredicted RBP11.08□□□□□ -0.64
SEC16A-207ENST00000453963 MAGEB1P43366 347 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 MSMO1Q15800 293 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 ZBTB37Q5TC79 503 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 PRAMEF9Q5VWM5 478 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 ACOT7LQ6ZUV0 252 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 OR10Z1Q8NGY1 313 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 BORCS7Q96B45 105 aa11.08□□□□□ -0.64
SEC16A-207ENST00000453963 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.08□□□□□ -0.64
SEC16A-207ENST00000453963 NSG1A0A0A6YYJ2 146 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 PLSCR5A0PG75 271 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 PRSS44E7EML9 344 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 AIPO00170 330 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 SELENOFO60613 162 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 TMEM127O75204 238 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 GDF1P27539 372 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 TRHRP34981 398 aaPredicted RBP11.07□□□□□ -0.64
SEC16A-207ENST00000453963 IRS1P35568 1242 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 RFX2P48378 723 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 HSD17B7P56937 341 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 CYHR1Q6ZMK1 362 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 NLRC3Q7RTR2 1065 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 MISPQ8IVT2 679 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 UCN3Q969E3 161 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 OCSTAMPQ9BR26 566 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 SAMD10Q9BYL1 202 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 EXOSC3Q9NQT5 275 aaKnown RBP11.07□□□□□ -0.64
SEC16A-207ENST00000453963 EMC9Q9Y3B6 208 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 A0A0U1RQK1 487 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 PPP1R2P9O14990 202 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 DDAH2O95865 285 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 ZNF93P35789 620 aaPredicted RBP11.07□□□□□ -0.64
SEC16A-207ENST00000453963 OR1D4P47884 311 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 TOR2AQ5JU69 321 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 LIPNQ5VXI9 398 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 ASB13Q8WXK3 278 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 TCTN2Q96GX1 697 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 SPNS1Q9H2V7 528 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 HRASLSQ9HDD0 168 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 TRBV11-1A0A0K0K1C0 115 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 BCL6P41182 706 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 ZNF74Q16587 644 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 NKG7Q16617 165 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 BTLAQ7Z6A9 289 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 Q96M85 177 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 OBP2AQ9NY56 170 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 THAP10Q9P2Z0 257 aaPredicted RBP11.07□□□□□ -0.64
SEC16A-207ENST00000453963 GPR160Q9UJ42 338 aa11.07□□□□□ -0.64
SEC16A-207ENST00000453963 FBXL4Q9UKA2 621 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms