RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 JSRP1Q96MG2 331 aaPredicted RBP10.6□□□□□ -0.71
VTA1-203ENST00000452973 AGAP4Q96P64 663 aa10.6□□□□□ -0.71
VTA1-203ENST00000452973 ELOVL3Q9HB03 270 aa10.6□□□□□ -0.71
VTA1-203ENST00000452973 NPIPA1Q9UND3 350 aa10.6□□□□□ -0.71
VTA1-203ENST00000452973 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 FAM240BA0A1B0GVZ2 78 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 SLC22A23A1A5C7 686 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 MEIOCA2RUB1 952 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 C9J4A7 227 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 EFNA2O43921 213 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 GATBO75879 557 aaKnown RBP10.59□□□□□ -0.71
VTA1-203ENST00000452973 MAS1P04201 325 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 IMPDH2P12268 514 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 SDHBP21912 280 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 MAP2K3P46734 347 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 SRP9P49458 86 aaKnown RBP10.59□□□□□ -0.71
VTA1-203ENST00000452973 METAP1DQ6UB28 335 aaPredicted RBP10.59□□□□□ -0.71
VTA1-203ENST00000452973 PLET1Q6UQ28 207 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 WDFY1Q8IWB7 410 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 ZNF519Q8TB69 540 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 LGALS14Q8TCE9 139 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 STK35Q8TDR2 534 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 ST8SIA1Q92185 356 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 RNF166Q96A37 237 aaPredicted RBP10.59□□□□□ -0.71
VTA1-203ENST00000452973 NKX3-1Q99801 234 aaPredicted RBP10.59□□□□□ -0.71
VTA1-203ENST00000452973 THAP7Q9BT49 309 aaPredicted RBP10.59□□□□□ -0.71
VTA1-203ENST00000452973 BEX2Q9BXY8 128 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 TRAV1-2A0A0B4J238 106 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 MS4A18H0YCH9 400 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 LYRM1O43325 122 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 SYPP08247 313 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 PRKAR1AP10644 381 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 APOBEC1P41238 236 aaKnown RBP10.59□□□□□ -0.71
VTA1-203ENST00000452973 RPS18P62269 152 aaKnown RBP10.59□□□□□ -0.71
VTA1-203ENST00000452973 CBX3Q13185 183 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 MS4A18Q3C1V0 323 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 LINC00346Q8IVM7 164 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 BMPERQ8N8U9 685 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 OTOSQ8NHW6 89 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 KCTD12Q96CX2 325 aaKnown RBP10.59□□□□□ -0.71
VTA1-203ENST00000452973 DDIT4LQ96D03 193 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 MAP6Q96JE9 813 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 TCF7L1Q9HCS4 588 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 MRPL22Q9NWU5 206 aaKnown RBP10.59□□□□□ -0.71
VTA1-203ENST00000452973 ANKRD10Q9NXR5 420 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 WIF1Q9Y5W5 379 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 B3GALT1Q9Y5Z6 326 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 EML6Q6ZMW3 1958 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 FTCDNL1E5RQL4 147 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 GPRIN2O60269 458 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 UMODP07911 640 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 CD3GP09693 182 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 NPR2P20594 1047 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 YIF1BQ5BJH7 314 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 H1FNTQ75WM6 255 aaPredicted RBP10.59□□□□□ -0.71
VTA1-203ENST00000452973 PRSS45Q7RTY3 260 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 KRT77Q7Z794 578 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 UBQLNLQ8IYU4 475 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 OR2G2Q8NGZ5 317 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 SPACA9Q96E40 222 aaPredicted RBP10.59□□□□□ -0.71
VTA1-203ENST00000452973 ZC3H10Q96K80 434 aaKnown RBP10.59□□□□□ -0.71
VTA1-203ENST00000452973 DMRTB1Q96MA1 342 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 OR5B2Q96R09 309 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 MRPL39Q9NYK5 338 aaKnown RBP10.59□□□□□ -0.71
VTA1-203ENST00000452973 SLC22A13Q9Y226 551 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 FKBP7Q9Y680 259 aa10.59□□□□□ -0.71
VTA1-203ENST00000452973 PMS2P1A4D2B8 440 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 NTN3O00634 580 aaPredicted RBP10.58□□□□□ -0.72
VTA1-203ENST00000452973 EIF1AYO14602 144 aaKnown RBP10.58□□□□□ -0.72
VTA1-203ENST00000452973 ABHD16AO95870 558 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 WNT11O96014 354 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 ADRB1P08588 477 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 EIF1AXP47813 144 aaKnown RBP10.58□□□□□ -0.72
VTA1-203ENST00000452973 MYBPHQ13203 477 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 EIF2B1Q14232 305 aaKnown RBP10.58□□□□□ -0.72
VTA1-203ENST00000452973 PCOLCEQ15113 449 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 SLC23A3Q6PIS1 610 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 KCTD20Q7Z5Y7 419 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 TEX19Q8NA77 164 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 OR4K17Q8NGC6 315 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 TTC9Q92623 222 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 GCDHQ92947 438 aaPredicted RBP10.58□□□□□ -0.72
VTA1-203ENST00000452973 TMEM106AQ96A25 262 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 PPIEQ9UNP9 301 aaKnown RBP10.58□□□□□ -0.72
VTA1-203ENST00000452973 RBMX2Q9Y388 322 aaKnown RBP10.58□□□□□ -0.72
VTA1-203ENST00000452973 TMEM14AQ9Y6G1 99 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 TNRC6BQ9UPQ9 1833 aaKnown RBP10.58□□□□□ -0.72
VTA1-203ENST00000452973 LDOC1O95751 146 aaPredicted RBP10.58□□□□□ -0.72
VTA1-203ENST00000452973 GLO1Q04760 184 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 MZT2BQ6NZ67 158 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 CORO6Q6QEF8 472 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 TSEN15Q8WW01 171 aaKnown RBP10.58□□□□□ -0.72
VTA1-203ENST00000452973 RFT1Q96AA3 541 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 COMMD4Q9H0A8 199 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 SLC26A1Q9H2B4 701 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 ZNF160Q9HCG1 818 aa10.58□□□□□ -0.72
VTA1-203ENST00000452973 IGKV1D-43A0A0B4J1Z2 117 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 TRABD2BA6NFA1 517 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 KLF7O75840 302 aaPredicted RBP10.57□□□□□ -0.72
VTA1-203ENST00000452973 FBXO45P0C2W1 286 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms