RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 RPN2P04844 631 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 CHRM4P08173 479 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 IL9P15248 144 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 ST6GAL1P15907 406 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 PTNP21246 168 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 EDNRAP25101 427 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 MSX1P28360 303 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 RPS10P46783 165 aaKnown RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 RHOAP61586 193 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 HTRA4P83105 476 aaPredicted RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 ARF5P84085 180 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 GRB14Q14449 540 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 RHEBQ15382 184 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 FNDC3BQ53EP0 1204 aaKnown RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 PLEKHS1Q5SXH7 462 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 ZNF385CQ66K41 422 aaPredicted RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 OR2A2Q6IF42 318 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 RPL22L1Q6P5R6 122 aaKnown RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 UNQ9370/PRO34162Q6UXP9 181 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 HEPN1Q6WQI6 88 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 MBOAT2Q6ZWT7 520 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 PRR18Q8N4B5 295 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 PNLDC1Q8NA58 520 aaKnown RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 OR9A2Q8NGT5 310 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 OR56A3Q8NH54 315 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 SUN3Q8TAQ9 357 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 TMEM255BQ8WV15 326 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 DCUN1D4Q92564 292 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 ZBTB8AQ96BR9 441 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 OR5B2Q96R09 309 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 SLC25A21Q9BQT8 299 aaPredicted RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 ATG101Q9BSB4 218 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 NDUFAF3Q9BU61 184 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 POTEKPQ9BYX7 375 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 OR52D1Q9H346 318 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 FKRPQ9H9S5 495 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 LMAN1LQ9HAT1 526 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 MYOZ1Q9NP98 299 aaPredicted RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 KCNE5Q9UJ90 142 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 SLC13A4Q9UKG4 626 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 SMIM35A0A1B0GVV1 85 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 A8MWP6 167 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 BHLHE40O14503 412 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 PPP1R2P9O14990 202 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 FKTNO75072 461 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 SLC16A8O95907 504 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 CD160O95971 181 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 LRG1P02750 347 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 CLUP10909 449 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 MAOAP21397 527 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 MAS1LP35410 378 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 PCBP4P57723 403 aaKnown RBP7.85□□□□□ -1.15
LSM5-208ENST00000450169 ACTA2P62736 377 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 ACTG2P63267 376 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 LTBQ06643 244 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 SLBPQ14493 270 aaKnown RBP eCLIP7.85□□□□□ -1.15
LSM5-208ENST00000450169 RNASE10Q5GAN6 216 aaKnown RBP7.85□□□□□ -1.15
LSM5-208ENST00000450169 FRRS1Q6ZNA5 592 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 DND1Q8IYX4 353 aaKnown RBP7.85□□□□□ -1.15
LSM5-208ENST00000450169 CLEC1AQ8NC01 280 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 ACBD4Q8NC06 268 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 ASB17Q8WXJ9 295 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 GAL3ST3Q96A11 431 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 SLC35G5Q96KT7 338 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 ZNF350Q9GZX5 532 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 OPN3Q9H1Y3 402 aaPredicted RBP7.85□□□□□ -1.15
LSM5-208ENST00000450169 BCL2L10Q9HD36 194 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 C19orf12Q9NSK7 152 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 STEAP1Q9UHE8 339 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 CSAG2Q9Y5P2 127 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 PLXNB3Q9ULL4 1909 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.85□□□□□ -1.15
LSM5-208ENST00000450169 ARL5CA6NH57 179 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 ZNF587BE7ETH6 402 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 RPL36A-HNRNPH2H7BZ11 118 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 C6P13671 934 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 MYOGP15173 224 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 ELNP15502 786 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 HLA-GP17693 338 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 CD1CP29017 333 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 GRK4P32298 578 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 ZNF84P51523 738 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 RAP1AP62834 184 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 ZNF177Q13360 481 aaPredicted RBP7.85□□□□□ -1.15
LSM5-208ENST00000450169 COTL1Q14019 142 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 TOMM20Q15388 145 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 NR0B2Q15466 257 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 CDKN3Q16667 212 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 CCSMST1Q4G0I0 132 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 KHDC3LQ587J8 217 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 RNF219Q5W0B1 726 aaPredicted RBP7.85□□□□□ -1.15
LSM5-208ENST00000450169 GABRG1Q8N1C3 465 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 SYS1Q8N2H4 156 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 CBARPQ8N350 705 aaPredicted RBP7.85□□□□□ -1.15
LSM5-208ENST00000450169 PRSS35Q8N3Z0 413 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 BPIFB2Q8N4F0 458 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 FRMD1Q8N878 549 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 OR1J1Q8NGS3 322 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 OR5R1Q8NH85 324 aa7.85□□□□□ -1.15
LSM5-208ENST00000450169 OR10J5Q8NHC4 309 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms