RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 ATP6AP1Q15904 470 aa11.49□□□□□ -0.57
ERGIC3-209ENST00000447986 BEX5Q5H9J7 111 aa11.49□□□□□ -0.57
ERGIC3-209ENST00000447986 ZNF620Q6ZNG0 422 aa11.49□□□□□ -0.57
ERGIC3-209ENST00000447986 RASSF6Q6ZTQ3 369 aa11.49□□□□□ -0.57
ERGIC3-209ENST00000447986 LINGO2Q7L985 606 aa11.49□□□□□ -0.57
ERGIC3-209ENST00000447986 SYT14Q8NB59 555 aa11.49□□□□□ -0.57
ERGIC3-209ENST00000447986 GTPBP3Q969Y2 492 aaKnown RBP11.49□□□□□ -0.57
ERGIC3-209ENST00000447986 NRBF2Q96F24 287 aa11.49□□□□□ -0.57
ERGIC3-209ENST00000447986 TSPAN32Q96QS1 320 aa11.49□□□□□ -0.57
ERGIC3-209ENST00000447986 ALG12Q9BV10 488 aa11.49□□□□□ -0.57
ERGIC3-209ENST00000447986 MRPL13Q9BYD1 178 aaKnown RBP11.49□□□□□ -0.57
ERGIC3-209ENST00000447986 SMURF2Q9HAU4 748 aa11.49□□□□□ -0.57
ERGIC3-209ENST00000447986 MOV10Q9HCE1 1003 aaKnown RBP11.49□□□□□ -0.57
ERGIC3-209ENST00000447986 IL20RAQ9UHF4 553 aa11.49□□□□□ -0.57
ERGIC3-209ENST00000447986 ADAM18Q9Y3Q7 739 aa11.49□□□□□ -0.57
ERGIC3-209ENST00000447986 ARHGEF9O43307 516 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 AHCYL1O43865 530 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 QDPRP09417 244 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 ANXA8P13928 327 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 ARF1P84077 181 aaKnown RBP11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 HIST3H3Q16695 136 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 TBRG1Q3YBR2 411 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 PHYHD1Q5SRE7 291 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 THEM4Q5T1C6 240 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 SHQ1Q6PI26 577 aaKnown RBP11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 CCDC36Q8IYA8 594 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 ZNF295-AS1Q8N0V1 137 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 CLDN22Q8N7P3 220 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 OR52N5Q8NH56 324 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 ZNF519Q8TB69 540 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 MAGEE2Q8TD90 523 aaPredicted RBP11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 HDAC2Q92769 488 aaKnown RBP11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 MCHR2Q969V1 340 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 ERMAPQ96PL5 475 aaPredicted RBP11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 FEVQ99581 238 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 FOXB1Q99853 325 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 IFT27Q9BW83 186 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 ESRP2Q9H6T0 727 aaKnown RBP11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 SLC17A5Q9NRA2 495 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 KIF17Q9P2E2 1029 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 IER3IP1Q9Y5U9 82 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 CDH10Q9Y6N8 788 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 PTPN13Q12923 2485 aa11.48□□□□□ -0.57
ERGIC3-209ENST00000447986 IMPA2O14732 288 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 DHHO43323 396 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 IDH3BO43837 385 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 CTAG2O75638 210 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 FARS2O95363 451 aaKnown RBP11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 THBDP07204 575 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 ZNF26P17031 533 aaPredicted RBP11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 GUCA1AP43080 201 aaPredicted RBP11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 FXYD6P3P58550 94 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 RUNX1T1Q06455 604 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 HIKESHIQ53FT3 197 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 KLHL17Q6TDP4 642 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 CD300LDQ6UXZ3 194 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 C22orf34Q6ZV56 151 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 FAM122BQ7Z309 247 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 ADCK1Q86TW2 530 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 HIPK1Q86Z02 1210 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 ZDHHC13Q8IUH4 622 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 ATG16L2Q8NAA4 619 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 OR5K1Q8NHB7 308 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 PYDC1Q8WXC3 89 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 DNAJC9Q8WXX5 260 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 NANOS1Q8WY41 292 aaKnown RBP11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 SAMD8Q96LT4 415 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 Q96M85 177 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 RASSF1Q9NS23 344 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 TBC1D23Q9NUY8 699 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 IL20Q9NYY1 176 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 SLC25A15Q9Y619 301 aa11.47□□□□□ -0.57
ERGIC3-209ENST00000447986 A0A096LPE4 126 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 TEX13CA0A0J9YWL9 993 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 A0A1W2PPZ6 126 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 G3V2T6 193 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 ARPC3O15145 178 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 MGRN1O60291 552 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 PPP1R3DO95685 299 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 ZNF23P17027 643 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 CAPZA2P47755 286 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 MYBPC1Q00872 1141 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 KRR1Q13601 381 aaKnown RBP11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 LRFN4Q6PJG9 635 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 ZNF813Q6ZN06 617 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 ZNF627Q7L945 461 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 TMEM179BQ7Z7N9 219 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 JAZF1Q86VZ6 243 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 WDFY1Q8IWB7 410 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 LRTOMTQ8WZ04 291 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 BCL2L2Q92843 193 aaPredicted RBP11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 STMN2Q93045 179 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 ZNF837Q96EG3 531 aaPredicted RBP11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 PIK3IP1Q96FE7 263 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 NIPSNAP1Q9BPW8 284 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 CLEC4MQ9H2X3 399 aaPredicted RBP11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 DENND2DQ9H6A0 471 aaPredicted RBP11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 EGLN3Q9H6Z9 239 aa11.46□□□□□ -0.57
ERGIC3-209ENST00000447986 FREM1Q5H8C1 2179 aa11.46□□□□□ -0.58
ERGIC3-209ENST00000447986 ARPC4-TTLL3A0A0A6YYG9 625 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms