RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 GTF2F2P13984 249 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 CEBPBP17676 345 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 SRSF5Q13243 272 aaKnown RBP17.5■□□□□ 0.39
HMGA1-205ENST00000447654 HNF4GQ14541 408 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 TCEAL5Q5H9L2 206 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 OR4K17Q8NGC6 315 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 UBE2E3Q969T4 207 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 MICU1Q9BPX6 476 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 TRPV4Q9HBA0 871 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 SLC27A6Q9Y2P4 619 aa17.5■□□□□ 0.39
HMGA1-205ENST00000447654 C7orf77A4D0Y5 90 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 SLC2A5P22732 501 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 GPR4P46093 362 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 GSK3AP49840 483 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 ATP1B3P54709 279 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 CASP6P55212 293 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 ACTBP60709 375 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 ACTG1P63261 375 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 NHLH2Q02577 135 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 NRMQ8IXM6 262 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 BEND2Q8NDZ0 799 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 OR4K14Q8NGD5 310 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 RPS4Y2Q8TD47 263 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 ADAMTS17Q8TE56 1095 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 KIRREL1Q96J84 757 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 ACTRT3Q9BYD9 372 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 CXorf51AA0A1B0GTR3 108 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 A0A1W2PPH5 198 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 TMEM202A6NGA9 273 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 RPL36A-HNRNPH2H7BZ11 118 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 ZNF208O43345 1280 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 CATP04040 527 aaKnown RBP17.49■□□□□ 0.39
HMGA1-205ENST00000447654 PCP4P48539 62 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 METAP1P53582 386 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 STEAP1BQ6NZ63 245 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 FBXO46Q6PJ61 603 aaPredicted RBP17.49■□□□□ 0.39
HMGA1-205ENST00000447654 DHRS11Q6UWP2 260 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 TGIF2LXQ8IUE1 241 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 DND1Q8IYX4 353 aaKnown RBP17.49■□□□□ 0.39
HMGA1-205ENST00000447654 NEIL2Q969S2 332 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 RSPRY1Q96DX4 576 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 PELI1Q96FA3 418 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 MISP3Q96FF7 219 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 SLITRK2Q9H156 845 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 OR52D1Q9H346 318 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 MED20Q9H944 212 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 CYTL1Q9NRR1 136 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 KCNE5Q9UJ90 142 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 TMED3Q9Y3Q3 217 aa17.49■□□□□ 0.39
HMGA1-205ENST00000447654 ELOA3CA0A087WX78 387 aaPredicted RBP17.48■□□□□ 0.39
HMGA1-205ENST00000447654 ZC3H12DA2A288 527 aaKnown RBP17.48■□□□□ 0.39
HMGA1-205ENST00000447654 UNC119BA6NIH7 251 aa17.48■□□□□ 0.39
HMGA1-205ENST00000447654 IFITM10A6NMD0 228 aa17.48■□□□□ 0.39
HMGA1-205ENST00000447654 AK1P00568 194 aa17.48■□□□□ 0.39
HMGA1-205ENST00000447654 TGFB1P01137 390 aa17.48■□□□□ 0.39
HMGA1-205ENST00000447654 ITPKBP27987 946 aa17.48■□□□□ 0.39
HMGA1-205ENST00000447654 ACY1Q03154 408 aa17.48■□□□□ 0.39
HMGA1-205ENST00000447654 SLC35D3Q5M8T2 416 aa17.48■□□□□ 0.39
HMGA1-205ENST00000447654 NPSR1Q6W5P4 371 aa17.48■□□□□ 0.39
HMGA1-205ENST00000447654 CLEC1AQ8NC01 280 aa17.48■□□□□ 0.39
HMGA1-205ENST00000447654 TMED6Q8WW62 240 aa17.48■□□□□ 0.39
HMGA1-205ENST00000447654 CDCA3Q99618 268 aaPredicted RBP17.48■□□□□ 0.39
HMGA1-205ENST00000447654 PIGQQ9BRB3 760 aa17.48■□□□□ 0.39
HMGA1-205ENST00000447654 SLC17A9Q9BYT1 436 aa17.48■□□□□ 0.39
HMGA1-205ENST00000447654 SYT4Q9H2B2 425 aa17.48■□□□□ 0.39
HMGA1-205ENST00000447654 C19orf12Q9NSK7 152 aa17.48■□□□□ 0.39
HMGA1-205ENST00000447654 ZNF107Q9UII5 783 aaPredicted RBP17.48■□□□□ 0.39
HMGA1-205ENST00000447654 GDF2Q9UK05 429 aaPredicted RBP17.48■□□□□ 0.39
HMGA1-205ENST00000447654 TRBV2A0A0J9YWF9 115 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 TVP23AA6NH52 213 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 OR52A4PA6NMU1 304 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 PIN1P1O15428 100 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 DNAJB6O75190 326 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 ATP1B2P14415 290 aaPredicted RBP17.47■□□□□ 0.39
HMGA1-205ENST00000447654 TIMP2P16035 220 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 BMP7P18075 431 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 DHRS2Q13268 280 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 KIAA0141Q14154 515 aaPredicted RBP17.47■□□□□ 0.39
HMGA1-205ENST00000447654 SLBPQ14493 270 aaKnown RBP eCLIP17.47■□□□□ 0.39
HMGA1-205ENST00000447654 AWAT1Q58HT5 328 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 ADAM5Q6NVV9 412 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 FIGNL1Q6PIW4 674 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 ZNF614Q8N883 585 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 OR5R1Q8NH85 324 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 TCTN2Q96GX1 697 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 ATG5Q9H1Y0 275 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 YBX2Q9Y2T7 364 aaKnown RBP17.47■□□□□ 0.39
HMGA1-205ENST00000447654 MYO10Q9HD67 2058 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 A0A0A6YYC8 382 aaPredicted RBP17.47■□□□□ 0.39
HMGA1-205ENST00000447654 LINC01553A4QN01 128 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 I3L1I5 382 aaPredicted RBP17.47■□□□□ 0.39
HMGA1-205ENST00000447654 ZGLP1P0C6A0 271 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 OR2T7P0C7T2 308 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 PTHLHP12272 177 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 CD1CP29017 333 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 IMPA1P29218 277 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 TSPAN7P41732 249 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 TAS2R19P59542 299 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 NKAIN2Q5VXU1 208 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 COMMD1Q8N668 190 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms