RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 MVDP53602 400 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 ATP1B3P54709 279 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 CDKN2DP55273 166 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 SELENOTP62341 195 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 NCMAPQ5T1S8 102 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 SDHAF4Q5VUM1 108 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 DET1Q7L5Y6 550 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 LAS2Q8IYD9 372 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 C8orf31Q8N9H6 132 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 C2CD4CQ8TF44 421 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 CCDC107Q8WV48 283 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 WWTR1Q9GZV5 400 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 TMEM27Q9HBJ8 222 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 FBXO6Q9NRD1 293 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-206ENST00000441438 TMEM181Q9P2C4 612 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 C14orf166Q9Y224 244 aaKnown RBP9.5□□□□□ -0.89
SYNE2-206ENST00000441438 IGSF6O95976 241 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 BPGMP07738 259 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 SLC18A2Q05940 514 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 GRB14Q14449 540 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 BICRALQ6AI39 1079 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 ZNF585AQ6P3V2 769 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 SLCO4C1Q6ZQN7 724 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 PRICKLE2Q7Z3G6 844 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 DNAJC22Q8N4W6 341 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 SIDT2Q8NBJ9 832 aaKnown RBP9.5□□□□□ -0.89
SYNE2-206ENST00000441438 SCAMP4Q969E2 229 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 TBX5Q99593 518 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 ARHGDIGQ99819 225 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 KATNBL1Q9H079 304 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 NPAP1Q9NZP6 1156 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 SS18L2Q9UHA2 77 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 UFC1Q9Y3C8 167 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 K7EN84 100 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 DSCR3O14972 297 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 PRAF2O60831 178 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 ALDOBP05062 364 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 TFAP2AP05549 437 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 SBK3P0C264 359 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 SLC35G4P0C7Q5 338 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 OMGP23515 440 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 SDC4P31431 198 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 PSG5Q15238 335 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 SPDYE7PQ495Y7 208 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 SAMD4BQ5PRF9 694 aaKnown RBP9.5□□□□□ -0.89
SYNE2-206ENST00000441438 XKRXQ6PP77 449 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 TCF24Q7RTU0 167 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 OR52I2Q8NH67 350 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 ZNF582Q96NG8 517 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-206ENST00000441438 COL25A1Q9BXS0 654 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-206ENST00000441438 UGT2B28Q9BY64 529 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 CHST5Q9GZS9 411 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 ACSS3Q9H6R3 686 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 ZNF696Q9H7X3 374 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 OR14J1Q9UGF5 321 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 PSORS1C1Q9UIG5 152 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 HHLA2Q9UM44 414 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 TMEM129A0AVI4 362 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 CXorf65A6NEN9 183 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 DNASE2O00115 360 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-206ENST00000441438 NARSO43776 548 aaKnown RBP9.49□□□□□ -0.89
SYNE2-206ENST00000441438 SOX15O60248 233 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 OR8U8P0C7N1 319 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 LIPCP11150 499 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 OSTNP61366 133 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 DLX2Q07687 328 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-206ENST00000441438 SOWAHCQ53LP3 525 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-206ENST00000441438 CAPN13Q6MZZ7 669 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-206ENST00000441438 TMPRSS11AQ6ZMR5 421 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 COMMD2Q86X83 199 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 ADGRF3Q8IZF5 1079 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 OR8U1Q8NH10 309 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 CDK15Q96Q40 435 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 OSBPL11Q9BXB4 747 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 LAT2Q9GZY6 243 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 LHX9Q9NQ69 397 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 C21orf140B9A014 251 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 MT-CO2P00403 227 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 JCHAINP01591 159 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 CD48P09326 243 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 MYL2P10916 166 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 CD58P19256 250 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 AOC1P19801 751 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 CDH12P55289 794 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 CLDN12P56749 244 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 CD81P60033 236 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 CRMP1Q14194 572 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 SFT2D3Q587I9 215 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 DRAM2Q6UX65 266 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 PLXDC2Q6UX71 529 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 SSX7Q7RTT5 188 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 CTHRC1Q96CG8 243 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 TBL1XR1Q9BZK7 514 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 FAM124BQ9H5Z6 455 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-206ENST00000441438 KIF25Q9UIL4 384 aa9.49□□□□□ -0.89
SYNE2-206ENST00000441438 A0A1W2PPE3 182 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 PDYNP01213 254 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 FAHP16930 419 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 SNRPFP62306 86 aaKnown RBP9.48□□□□□ -0.89
SYNE2-206ENST00000441438 POU2AF1Q16633 256 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms