RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 CTPS2Q9NRF8 586 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 EXD2Q9NVH0 621 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 ZNF232Q9UNY5 417 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 A0A096LPE4 126 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 A0A1W2PPZ6 126 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 TMEM247A6NEH6 219 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 SLC22A31A6NKX4 558 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 CYP7B1O75881 506 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 CELA3BP08861 270 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 HSD17B1P14061 328 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 GLRXP35754 106 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 RBMXP38159 391 aaKnown RBP9.5□□□□□ -0.89
CSTF3-203ENST00000438862 ALDH3B1P43353 468 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 MTNR1AP48039 350 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 TEKQ02763 1124 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 LASP1Q14847 261 aaKnown RBP9.5□□□□□ -0.89
CSTF3-203ENST00000438862 GTDC1Q4AE62 458 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 VAX1Q5SQQ9 334 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 ATAD3BQ5T9A4 648 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 OLFML2AQ68BL7 652 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 ASPHD2Q6ICH7 369 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 KRT80Q6KB66 452 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 PAQR6Q6TCH4 344 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 ASRGL1Q7L266 308 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 GRINAQ7Z429 371 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 MYPOPQ86VE0 399 aaPredicted RBP9.5□□□□□ -0.89
CSTF3-203ENST00000438862 CALHM3Q86XJ0 350 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 RNF130Q86XS8 419 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 DEFB107AQ8IZN7 70 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 BCL6BQ8N143 479 aaPredicted RBP9.5□□□□□ -0.89
CSTF3-203ENST00000438862 OR5AK3PQ8NH89 298 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 TAF15Q92804 592 aaKnown RBP eCLIP9.5□□□□□ -0.89
CSTF3-203ENST00000438862 DNAJA3Q96EY1 480 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 ZNF48Q96MX3 618 aaPredicted RBP9.5□□□□□ -0.89
CSTF3-203ENST00000438862 OR11A1Q9GZK7 315 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 LRMDAQ9H2I8 198 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 CRLF2Q9HC73 371 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 BRD7Q9NPI1 651 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 POLE3Q9NRF9 147 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 CALML5Q9NZT1 146 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 ZNF346Q9UL40 294 aaKnown RBP9.5□□□□□ -0.89
CSTF3-203ENST00000438862 NOX1Q9Y5S8 564 aa9.5□□□□□ -0.89
CSTF3-203ENST00000438862 HMGN4O00479 90 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 GSC2O15499 205 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 DNAJC8O75937 253 aaPredicted RBP9.49□□□□□ -0.89
CSTF3-203ENST00000438862 NCR1O76036 304 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 CSTAP01040 98 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 H2AFB1P0C5Y9 115 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 H2AFB2P0C5Z0 115 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 CRATP43155 626 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 CRYBB2P43320 205 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 RAD52P43351 418 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 GZMMP51124 257 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 MAP2K6P52564 334 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 SLC7A2P52569 658 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 DSTNP60981 165 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 HLXQ14774 488 aaPredicted RBP9.49□□□□□ -0.89
CSTF3-203ENST00000438862 TAF9Q16594 264 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 FXNQ16595 210 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 RABL3Q5HYI8 236 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 PDZK1Q5T2W1 519 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 AVPI1Q5T686 147 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 EIF3MQ7L2H7 374 aaKnown RBP9.49□□□□□ -0.89
CSTF3-203ENST00000438862 WDFY1Q8IWB7 410 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 CCDC36Q8IYA8 594 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 OR9K2Q8NGE7 335 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 ZNF563Q8TA94 476 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 RAB8BQ92930 207 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 DDIT4LQ96D03 193 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 ZNF583Q96ND8 569 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 ZNF385AQ96PM9 386 aaKnown RBP9.49□□□□□ -0.89
CSTF3-203ENST00000438862 TRNT1Q96Q11 434 aaKnown RBP9.49□□□□□ -0.89
CSTF3-203ENST00000438862 OR7D2Q96RA2 312 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 CDRT15Q96T59 188 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 MS4A7Q9GZW8 240 aaPredicted RBP9.49□□□□□ -0.89
CSTF3-203ENST00000438862 NELFAQ9H3P2 528 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 IKZF5Q9H5V7 419 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 A4GALTQ9NPC4 353 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 CMTM6Q9NX76 183 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 CD300AQ9UGN4 299 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 KLHL21Q9UJP4 597 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 ARHGAP32A7KAX9 2087 aa9.49□□□□□ -0.89
CSTF3-203ENST00000438862 FAM220BPB1ANY3 271 aa9.48□□□□□ -0.89
CSTF3-203ENST00000438862 NME4O00746 187 aa9.48□□□□□ -0.89
CSTF3-203ENST00000438862 ZNF208O43345 1280 aa9.48□□□□□ -0.89
CSTF3-203ENST00000438862 NGFP01138 241 aa9.48□□□□□ -0.89
CSTF3-203ENST00000438862 CRYBA1P05813 215 aa9.48□□□□□ -0.89
CSTF3-203ENST00000438862 TFPTP0C1Z6 253 aa9.48□□□□□ -0.89
CSTF3-203ENST00000438862 UBTFL6P0CB48 400 aaPredicted RBP9.48□□□□□ -0.89
CSTF3-203ENST00000438862 HTR3AP46098 478 aa9.48□□□□□ -0.89
CSTF3-203ENST00000438862 RAG2P55895 527 aa9.48□□□□□ -0.89
CSTF3-203ENST00000438862 MTPNP58546 118 aa9.48□□□□□ -0.89
CSTF3-203ENST00000438862 NCALDP61601 193 aa9.48□□□□□ -0.89
CSTF3-203ENST00000438862 RPS23P62266 143 aaKnown RBP9.48□□□□□ -0.89
CSTF3-203ENST00000438862 LIPEQ05469 1076 aa9.48□□□□□ -0.89
CSTF3-203ENST00000438862 NPRL3Q12980 569 aa9.48□□□□□ -0.89
CSTF3-203ENST00000438862 BNIP2Q12982 314 aa9.48□□□□□ -0.89
CSTF3-203ENST00000438862 ZNF141Q15928 474 aa9.48□□□□□ -0.89
CSTF3-203ENST00000438862 MSMPQ1L6U9 139 aa9.48□□□□□ -0.89
CSTF3-203ENST00000438862 BEAN1Q3B7T3 259 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms