RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 HYLS1Q96M11 299 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 SLC19A3Q9BZV2 496 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 KCND3Q9UK17 655 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 LOXL2Q9Y4K0 774 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 MN1Q10571 1320 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 COL4A6Q14031 1691 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 A0A0B4J293 547 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 A0A0B4J2E0 115 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 A0A1B0GX12 115 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 ZNF705EA8MWA4 302 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 ACOT7O00154 380 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 SYT7O43581 403 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 LSM11P83369 360 aaKnown RBP eCLIP10.54□□□□□ -0.721e-6■■■■□ 22.6
TRAPPC9-202ENST00000438773 RPL18Q07020 188 aaKnown RBP10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 XKRXQ6PP77 449 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 C6orf15Q6UXA7 325 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 SYT9Q86SS6 491 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR4Q3Q8NH05 313 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 SMAP2Q8WU79 429 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 FCAMRQ8WWV6 532 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 LMF1Q96S06 567 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 THAP7Q9BT49 309 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 TMEM269A0A1B0GVZ9 245 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 RBBP9O75884 186 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 GLCEO94923 617 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 AKR7A3O95154 331 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 POU3F2P20265 443 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 PTH2RP49190 550 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 ART1P52961 327 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 HCCSP53701 268 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 PSPHP78330 225 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 ABHD4Q8TB40 342 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 FAM71F1Q96KD3 344 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 UCK1Q9HA47 277 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 DNAJB12Q9NXW2 375 aaKnown RBP10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 TCF20Q9UGU0 1960 aaKnown RBP10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 A0A087WUJ7 227 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 E9PQ18 207 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 PRH1P02810 166 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 GTF2F2P13984 249 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 EIF1P41567 113 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 ARG2P78540 354 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 GRK1Q15835 563 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 RHBDD2Q6NTF9 364 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 H1FNTQ75WM6 255 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 D2HGDHQ8N465 521 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 VSTM2LQ96N03 204 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 EMC6Q9BV81 110 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 PLEK2Q9NYT0 353 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 BOKQ9UMX3 212 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 ZNF281Q9Y2X9 895 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 ZNF318Q5VUA4 2279 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 SDK2Q58EX2 2172 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 DOCK8Q8NF50 2099 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 H7C2Y5 167 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 NTN1O95631 604 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 WDPCPO95876 746 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 CLUP10909 449 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 CBLN3Q6UW01 205 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 ZNF704Q6ZNC4 412 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 GPR155Q7Z3F1 870 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR4D9Q8NGE8 314 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 PDCD1LG2Q9BQ51 273 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 SIGLEC7Q9Y286 467 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 PCDHGB2Q9Y5G2 931 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 F5H0A9 414 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 AGPAT2O15120 278 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 ARPC1BO15143 372 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 MAGEB4O15481 346 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 HYAL3O43820 417 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 DDOSTP39656 456 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 SRP9P49458 86 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 GPR85P60893 370 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 ACKR1Q16570 336 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 TMPRSS11FQ6ZWK6 438 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 ULBP2Q9BZM5 246 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 WDR76Q9H967 626 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 HHLA2Q9UM44 414 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 CDC42EP2O14613 210 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 SPI1P17947 270 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 SDHAP31040 664 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 APOBEC1P41238 236 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 RPS27P42677 84 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 CDK5Q00535 292 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 GALEQ14376 348 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 RAB11BQ15907 218 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 MEP1BQ16820 701 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 NKPD1Q17RQ9 610 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 TEX19Q8NA77 164 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 C3orf49Q96BT1 292 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 SRRQ9GZT4 340 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 FKRPQ9H9S5 495 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 V9GY05 133 aa10.53□□□□□ -0.72
TRAPPC9-202ENST00000438773 A0A0G2JMP0 313 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 A0A0X1KG70 313 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 TRDV1A0A1B0GX56 115 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 KANTRA0A1W2PQU2 76 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 MEGF11A6BM72 1044 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 DISC1C4P0D8 188 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms