RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 TFPTP0C1Z6 253 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 RNF224P0DH78 156 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 MBL2P11226 248 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 FASP25445 335 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 CRABP1P29762 137 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 MPIP34949 423 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 TIMP3P35625 211 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 VHLP40337 213 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 LEPP41159 167 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 THBS3P49746 956 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 IDH3GP51553 393 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 B3GALT5-AS1P59052 145 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR2B8PP59922 312 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 FAM3AP98173 230 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 ST3GAL1Q11201 340 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 SRSF6Q13247 344 aaKnown RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 ITPK1Q13572 414 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 POU2AF1Q16633 256 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 NDUFA9Q16795 377 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 DGUOKQ16854 277 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 TRMT5Q32P41 509 aaKnown RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 TMEM176BQ3YBM2 270 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 FFAR4Q5NUL3 377 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 PAPPA-AS1Q5QFB9 102 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 LPCAT4Q643R3 524 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 SAXO2Q658L1 398 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 TCEAL6Q6IPX3 200 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 FAM45BPQ6NSW5 357 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 ZNF530Q6P9A1 599 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 Q6ZTC4 211 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 LHFPL3Q86UP9 236 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 RALGPS2Q86X27 583 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 PHF13Q86YI8 300 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 ZNF547Q8IVP9 402 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 KIR2DL5AQ8N109 375 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 MREGQ8N565 214 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 TPRX1Q8N7U7 411 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 C12orf29Q8N999 325 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 CCDC54Q8NEL0 328 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 PXT1Q8NFP0 134 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR1S2Q8NGQ3 325 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR11L1Q8NGX0 322 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 KIR2DL5BQ8NHK3 375 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 C16orf52Q8NHV5 167 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 OLIG1Q8TAK6 271 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR5P2Q8WZ92 322 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 DLX4Q92988 240 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 ABTB1Q969K4 478 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 MRPL24Q96A35 216 aaKnown RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 ANKRD9Q96BM1 317 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 CXorf40BQ96DE9 158 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 NXPE2Q96DL1 559 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 ZBED6CLQ96FA7 236 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 RITA1Q96K30 269 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 NEDD4LQ96PU5 975 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 CLCC1Q96S66 551 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 CDCA3Q99618 268 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 EPYCQ99645 322 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 APOOQ9BUR5 198 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 HCAR1Q9BXC0 346 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 PCBD2Q9H0N5 130 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR51B5Q9H339 312 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 TPK1Q9H3S4 243 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 GLIPR2Q9H4G4 154 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 S100A14Q9HCY8 104 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 FBXO8Q9NRD0 319 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 SLC2A9Q9NRM0 540 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 AGPAT4Q9NRZ5 378 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 FGFR1OP2Q9NVK5 253 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 THUMPD1Q9NXG2 353 aaKnown RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 TMEM9Q9P0T7 183 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 IL36AQ9UHA7 158 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 PILRBQ9UKJ0 227 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 NDRG2Q9UN36 371 aaKnown RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 SCML2Q9UQR0 700 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 MTCH2Q9Y6C9 303 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 MROH2BQ7Z745 1585 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 TNRQ92752 1358 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 A0A0G2JK05 382 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 TRBV5-5A0A0J9YX44 114 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 GLYATL1P3A0A0U1RQE8 302 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 hCG_38984A0A1B0GV85 526 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 ASPDHA6ND91 283 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 LRIT2A6NDA9 550 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 A8MVM7 634 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 C21orf140B9A014 251 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 FTCDNL1E5RQL4 147 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 F5H5T6 163 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 PLPP1O14494 284 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 ACOT8O14734 319 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 TIMM23O14925 209 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 EPHB6O15197 1021 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 KIAA0513O60268 411 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 MPZL2O60487 215 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 HPGDSO60760 199 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 GATBO75879 557 aaKnown RBP3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 ANXA9O76027 345 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR7A10O76100 309 aa3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 GLSO94925 669 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P12-201ENST00000438594 ANGPTL1O95841 491 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms