RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 FEZF1A0PJY2 475 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 RNASEK-C17orf49H0YIS7 233 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 P2RX3P56373 397 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 ZP2Q05996 745 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 TMPRSS11FQ6ZWK6 438 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 H2BFWTQ7Z2G1 175 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 CBARPQ8N350 705 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-209ENST00000437951 C12orf42Q96LP6 360 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 FAM24AA6NFZ4 105 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 CBX7O95931 251 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 TNFRSF1BP20333 461 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 FFAR4Q5NUL3 377 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 FAM208AQ9UK61 1670 aaKnown RBP10.69□□□□□ -0.7
PTCH1-209ENST00000437951 PMP2P02689 132 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 RRASP10301 218 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 CD79AP11912 226 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 ZNF93P35789 620 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-209ENST00000437951 TCTAP57738 103 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 NHSL2Q5HYW2 709 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 ZNF626Q68DY1 528 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 TOMM20LQ6UXN7 152 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 EXTL1Q92935 676 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 GLTPD2A6NH11 291 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 NPIPB15A6NHN6 443 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-209ENST00000437951 FCGR2AP12318 317 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 BLVRBP30043 206 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-209ENST00000437951 GP2P55259 537 aaKnown RBP10.69□□□□□ -0.7
PTCH1-209ENST00000437951 SEMG2Q02383 582 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 OLIG2Q13516 323 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 ELAVL3Q14576 367 aaKnown RBP10.69□□□□□ -0.7
PTCH1-209ENST00000437951 ZNF787Q6DD87 383 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 OR5AP2Q8NGF4 316 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 TCTN2Q96GX1 697 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 FAAP24Q9BTP7 215 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 MDC1Q14676 2089 aaKnown RBP10.69□□□□□ -0.7
PTCH1-209ENST00000437951 BCL9O00512 1426 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 PHRF1Q9P1Y6 1649 aaKnown RBP10.69□□□□□ -0.7
PTCH1-209ENST00000437951 SPINT2O43291 252 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 HAPLN1P10915 354 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-209ENST00000437951 SDHBP21912 280 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 MAP2K6P52564 334 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 OR10J5Q8NHC4 309 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 FBXO27Q8NI29 283 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 PHYHIPLQ96FC7 376 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 SELENOIQ9C0D9 397 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 ATXN7L1Q9ULK2 861 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-209ENST00000437951 UNC13CQ8NB66 2214 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 A0A1W2PRU2 124 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 F7P08709 466 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-209ENST00000437951 GATMP50440 423 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 DHODHQ02127 395 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 BAP18Q8IXM2 172 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 ZFPM2Q8WW38 1151 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 FAM3CQ92520 227 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 HEYLQ9NQ87 328 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-209ENST00000437951 KNDC1Q76NI1 1749 aa10.69□□□□□ -0.7
PTCH1-209ENST00000437951 I6L893 689 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-209ENST00000437951 TBX18O95935 607 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 ORM1P02763 201 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 SDC1P18827 310 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 LOC102723971A0A1B0GUV8 181 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 ZNF320A2RRD8 509 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 ANTXRLA6NF34 631 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 HSBP1O75506 76 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 DAPP51397 102 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 HAGHQ16775 308 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 COX19Q49B96 90 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 FA2HQ7L5A8 372 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 OR2AE1Q8NHA4 323 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 ZNF845Q96IR2 970 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-209ENST00000437951 LPAR4Q99677 370 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 PADI1Q9ULC6 663 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 TERTO14746 1132 aaKnown RBP10.68□□□□□ -0.7
PTCH1-209ENST00000437951 RGS13O14921 159 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 HEXAP06865 529 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 SPINT3P49223 89 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 PKIAP61925 76 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 PKDCCQ504Y2 493 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 VN1R3Q9BXE9 311 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 FABP4P15090 132 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 TMEM102Q8N9M5 508 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-209ENST00000437951 TMEM106AQ96A25 262 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 ATF6BQ99941 703 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 NXF5Q9H1B4 397 aaKnown RBP10.68□□□□□ -0.7
PTCH1-209ENST00000437951 Q9Y3F1 56 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 PARP4Q9UKK3 1724 aaKnown RBP10.68□□□□□ -0.7
PTCH1-209ENST00000437951 ZNF860A6NHJ4 632 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 CLEC3BP05452 202 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 APEX1P27695 318 aaKnown RBP10.68□□□□□ -0.7
PTCH1-209ENST00000437951 RPL12P30050 165 aaKnown RBP10.68□□□□□ -0.7
PTCH1-209ENST00000437951 IKZF1Q13422 519 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 OR7A5Q15622 319 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 KDM4DQ6B0I6 523 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 BTNL3Q6UXE8 466 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 NAXDQ8IW45 347 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 SLC39A11Q8N1S5 342 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 DVL3Q92997 716 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-209ENST00000437951 UBQLN4Q9NRR5 601 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 GPR55Q9Y2T6 319 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-209ENST00000437951 SYT5O00445 386 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms