RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 IDSB3KWA1 339 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 KIF2AO00139 706 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 ACACBO00763 2458 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 PRRG1O14668 218 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 PFKFB2O60825 505 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 SNNO75324 88 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 AP2A1O95782 977 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 HPNP05981 417 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 POU2F1P14859 743 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 HTR1FP30939 366 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 RPL13AP40429 203 aaKnown RBP1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 NBL1P41271 181 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 SSR1P43307 286 aaKnown RBP1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 KIR2DS4P43632 304 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 HNMTP50135 292 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 GNB2P62879 340 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 NCBP1Q09161 790 aaKnown RBP1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 ARFRP1Q13795 201 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 SFT2D3Q587I9 215 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 XKR4Q5GH76 650 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 CASC10Q5T4H9 136 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 RIF1Q5UIP0 2472 aaKnown RBP1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 C1orf146Q5VVC0 180 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 ATL3Q6DD88 541 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 TGIF2LYQ8IUE0 185 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 VSTM4Q8IW00 320 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 OR2L13Q8N349 312 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 ZNF561Q8N587 486 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 ATP6V0D2Q8N8Y2 350 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 FAM133AQ8N9E0 248 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 NKAPP1Q8N9T2 125 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 LINC01555Q8NAE3 123 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 OR51S1Q8NGJ8 323 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 OR52I1Q8NGK6 324 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 NEIL3Q8TAT5 605 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 FBXO30Q8TB52 745 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 MAIP1Q8WWC4 291 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 ST8SIA1Q92185 356 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 RAPGEF5Q92565 580 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 MARC2Q969Z3 335 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 DYNLL2Q96FJ2 89 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 SLC41A3Q96GZ6 507 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 DOCK6Q96HP0 2047 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 TMEM101Q96IK0 257 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 PGLYRP4Q96LB8 373 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 SLC39A3Q9BRY0 314 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 OR51J1Q9H342 316 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 NHEJ1Q9H9Q4 299 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 PRPF19Q9UMS4 504 aaKnown RBP1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 RPL36Q9Y3U8 105 aaKnown RBP1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 MIA3Q5JRA6 1907 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 SMG1Q96Q15 3661 aaKnown RBP1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 EML5Q05BV3 1969 aa1.87□□□□□ -2.11
HMGB1P31-201ENST00000437242 PKD1L2Q7Z442 2459 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 OTOGLQ3ZCN5 2332 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 PHF3Q92576 2039 aaKnown RBP1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 TPRP12270 2363 aaKnown RBP1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 COL4A2P08572 1712 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 TRAV26-1A0A087WT03 109 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 A0A0G2JRQ6 117 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 A0A0J9YXY3 114 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 A0A1B0GUS0 222 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 LOC730098B7Z3J9 87 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 DCTN6O00399 190 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 POLR2DO15514 142 aaKnown RBP1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 UGT1A9O60656 530 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 ZNF780AO75290 641 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 MTX2O75431 263 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 CA11O75493 328 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 FLOT1O75955 427 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 CAPN1P07384 714 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 POLR2EP19388 210 aaKnown RBP1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 GCAP28676 217 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 CCT3P49368 545 aaKnown RBP1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 CASP4P49662 377 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 CEBPDP49716 269 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 PKNOX1P55347 436 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 BIDP55957 195 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 CSNK1G2P78368 415 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 FGL1Q08830 312 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 KLRB1Q12918 225 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 IL24Q13007 206 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 CHIT1Q13231 466 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 NSUN5P1Q3KNT7 163 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 PARP15Q460N3 678 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 CAVIN4Q5BKX8 364 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 FAM220AQ7Z4H9 259 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 TBC1D21Q8IYX1 336 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 RDH10Q8IZV5 341 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 TMEM123Q8N131 208 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 LRRC75A-AS1Q8N1F1 130 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 FTMTQ8N4E7 242 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 OR10G3Q8NGC4 313 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 BRSK1Q8TDC3 778 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 CHCHD10Q8WYQ3 142 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 UCN3Q969E3 161 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 GLT1D1Q96MS3 346 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 TBX15Q96SF7 602 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 CCT7Q99832 543 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 REEP4Q9H6H4 257 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms