RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 LSM14AQ8ND56 463 aaKnown RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 NPEPL1Q8NDH3 523 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 BBS1Q8NFJ9 593 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 OR9K2Q8NGE7 335 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 ZPLD1Q8TCW7 415 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 FAR1Q8WVX9 515 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 ZNRF4Q8WWF5 429 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 ASB10Q8WXI3 467 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 HDAC2Q92769 488 aaKnown RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 CPNE4Q96A23 557 aaPredicted RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 SARAFQ96BY9 339 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 SNRNP40Q96DI7 357 aaKnown RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 ZHX1-C8orf76Q96EF9 292 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 MISP3Q96FF7 219 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 LRR1Q96L50 414 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 ZNF582Q96NG8 517 aaPredicted RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 NR1H4Q96RI1 486 aaPredicted RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 NMNAT3Q96T66 252 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 SF3B5Q9BWJ5 86 aaKnown RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 PRRG3Q9BZD7 231 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 NMNAT2Q9BZQ4 307 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 NDEL1Q9GZM8 345 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 SLC25A18Q9H1K4 315 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 MED20Q9H944 212 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 TIGARQ9NQ88 270 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 HINT3Q9NQE9 182 aaKnown RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 PNPLA3Q9NST1 481 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 MED29Q9NX70 200 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 PAQR5Q9NXK6 330 aaPredicted RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 DNAJC27Q9NZQ0 273 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 KLHL13Q9P2N7 655 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 KLHL21Q9UJP4 597 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 ING1Q9UK53 422 aaPredicted RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 CAMK2AQ9UQM7 478 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 ATP23Q9Y6H3 246 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 OR14I1A6ND48 311 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 FAM181BA6NEQ2 426 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 TRIM64A6NGJ6 449 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 CLCA1A8K7I4 914 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 VSTM5A8MXK1 200 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 PRR23D1E9PI22 279 aaPredicted RBP6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 H7C1C5 153 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 SLC1A7O00341 560 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 ARHGEF9O43307 516 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 XPNPEP2O43895 674 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 VAMP5O95183 116 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 SYNGR4O95473 234 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 TGM6O95932 706 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 BCL10O95999 233 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 IFNGP01579 166 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 LYNP07948 512 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 RPSAP08865 295 aaKnown RBP6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 H2AFB1P0C5Y9 115 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 H2AFB2P0C5Z0 115 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 PRR23D2P0DMB1 279 aaPredicted RBP6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 CLUP10909 449 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 SFTPCP11686 197 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 FOSL1P15407 271 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 FSTP19883 344 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 SLC2A5P22732 501 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 CRHBPP24387 322 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 ACVR2AP27037 513 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 ACVR1BP36896 505 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 DAP3P51398 398 aaKnown RBP6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 NUDT6P53370 316 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 SLC16A1P53985 500 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 BIDP55957 195 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 SCAND1P57086 179 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 CXCR4P61073 352 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 RPS3AP61247 264 aaKnown RBP6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 LCN6P62502 163 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 KLRB1Q12918 225 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 C1DQ13901 141 aaKnown RBP6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 LY6DQ14210 128 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 PON3Q15166 354 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 RBM48Q5RL73 367 aaKnown RBP6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 MEDAGQ5VYS4 303 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 NXNL2Q5VZ03 156 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 LEG1Q6P5S2 330 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 FCRLAQ7L513 359 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 CXXC5Q7LFL8 322 aaKnown RBP6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 ADGRE4PQ86SQ3 457 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 GHDCQ8N2G8 530 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 SDR9C7Q8NEX9 313 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 BPIFB6Q8NFQ5 453 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 OR5M9Q8NGP3 310 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 OR6X1Q8NH79 312 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 FNDC9Q8TBE3 224 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 RNF128Q8TEB7 428 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 ABHD3Q8WU67 409 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 SGCDQ92629 289 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 ZNF566Q969W8 418 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 PLEKHA8Q96JA3 519 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 ZNF385AQ96PM9 386 aaKnown RBP6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 SLX1AQ9BQ83 275 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 RHNO1Q9BSD3 238 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 EMC6Q9BV81 110 aa6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 MRPL13Q9BYD1 178 aaKnown RBP6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 YTHDF1Q9BYJ9 559 aaKnown RBP6.24□□□□□ -1.41
LSM3P3-201ENST00000436601 FN3KQ9H479 309 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms