RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 MTFP1Q9UDX5 166 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 CENPVL1A0A0U1RR11 272 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 CXCL11O14625 94 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 GLSO94925 669 aaPredicted RBP6.82□□□□□ -1.32
CPSF6-202ENST00000435070 EPCAMP16422 314 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 MNDAP41218 407 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 EIF2B1Q14232 305 aaKnown RBP6.82□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF627Q7L945 461 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 GPR142Q7Z601 462 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 BAP18Q8IXM2 172 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 AMDHD1Q96NU7 426 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 TGM7Q96PF1 710 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 LMAN2LQ9H0V9 348 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 TMEM27Q9HBJ8 222 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 KLHL42Q9P2K6 505 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 METTL1Q9UBP6 276 aaKnown RBP6.82□□□□□ -1.32
CPSF6-202ENST00000435070 CASP8AP2Q9UKL3 1982 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 SPAG17Q6Q759 2223 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 HSBP1L1C9JCN9 74 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 AP4M1O00189 453 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 TERTO14746 1132 aaKnown RBP6.82□□□□□ -1.32
CPSF6-202ENST00000435070 ALOX12BO75342 701 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 ZFPL1O95159 310 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 PLGLB1Q02325 96 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 CHAF1BQ13112 559 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 WDR88Q6ZMY6 472 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 MOB1BQ7L9L4 216 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 ARRDC1Q8N5I2 433 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 FBXO22Q8NEZ5 403 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 OR10D4PQ8NGN7 298 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 TSEN15Q8WW01 171 aaKnown RBP6.82□□□□□ -1.32
CPSF6-202ENST00000435070 POM121Q96HA1 1249 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 ULBP3Q9BZM4 244 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 STEAP1Q9UHE8 339 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 SCN8AQ9UQD0 1980 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 POLR2AP24928 1970 aaKnown RBP6.82□□□□□ -1.32
CPSF6-202ENST00000435070 C1orf105O95561 183 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 TPT1P13693 172 aaKnown RBP6.82□□□□□ -1.32
CPSF6-202ENST00000435070 RAB4BP61018 213 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 CAP1Q01518 475 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 DUSP2Q05923 314 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 NR0B2Q15466 257 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 FUT10Q6P4F1 479 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 LCTLQ6UWM7 567 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 P4HA3Q7Z4N8 544 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 CCDC54Q8NEL0 328 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 CCDC107Q8WV48 283 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 BRI3BPQ8WY22 251 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 NKD1Q969G9 470 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 TIMM29Q9BSF4 260 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 SLC23A2Q9UGH3 650 aa6.82□□□□□ -1.32
CPSF6-202ENST00000435070 TMEM72A0PK05 275 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF840PA6NDX5 716 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 PHYHO14832 338 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 OR1F1O43749 312 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 VNN2O95498 520 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 GNB3P16520 340 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 ADRA2CP18825 462 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 IL12BP29460 328 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 PRSS3P35030 304 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 MC3RP41968 323 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 RPS27P42677 84 aaKnown RBP6.81□□□□□ -1.32
CPSF6-202ENST00000435070 RPS10P46783 165 aaKnown RBP6.81□□□□□ -1.32
CPSF6-202ENST00000435070 TMPPEQ6ZT21 453 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 DPPA2Q7Z7J5 298 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 GALNT16Q8N428 558 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 OR4K14Q8NGD5 310 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 TNFRSF13CQ96RJ3 184 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 INSM2Q96T92 566 aaPredicted RBP6.81□□□□□ -1.32
CPSF6-202ENST00000435070 IGLV3-16A0A075B6K0 115 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 A0A1B0GTQ1 180 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 A0A1W2PPE2 198 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 MYADML2A6NDP7 307 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 MED6O75586 246 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 PAPLNO95428 1278 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 RAB6AP20340 208 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 ACKR3P25106 362 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 CD70P32970 193 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 PCBP4P57723 403 aaKnown RBP6.81□□□□□ -1.32
CPSF6-202ENST00000435070 NANOS3P60323 173 aaKnown RBP6.81□□□□□ -1.32
CPSF6-202ENST00000435070 KIAA0141Q14154 515 aaPredicted RBP6.81□□□□□ -1.32
CPSF6-202ENST00000435070 ARSIQ5FYB1 569 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 PRAMEF14Q5SWL7 426 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 TXNDC8Q6A555 127 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF813Q6ZN06 617 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 GAREM2Q75VX8 874 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 CHST9Q7L1S5 443 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 OR5T3Q8NGG3 340 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 MIB2Q96AX9 1013 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 OR7D2Q96RA2 312 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 SLC35A3Q9Y2D2 325 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 CSAG2Q9Y5P2 127 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 BHLHE40O14503 412 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 GRM6O15303 877 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 RAB40ALP0C0E4 278 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 OR8G3PP0DMU2 310 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 ELNP15502 786 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 LAG3P18627 525 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 DECR1Q16698 335 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 ACTBL2Q562R1 376 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms