RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 TCRBV21S2A2A0A5A6 115 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 TTLL8A6PVC2 850 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 PRSS44E7EML9 344 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 CFDP00746 253 aaPredicted RBP10.25□□□□□ -0.77
USP4-205ENST00000431357 ANXA7P20073 488 aaKnown RBP10.25□□□□□ -0.77
USP4-205ENST00000431357 CSRP1P21291 193 aaKnown RBP10.25□□□□□ -0.77
USP4-205ENST00000431357 MAOAP21397 527 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 NFYAP23511 347 aaPredicted RBP10.25□□□□□ -0.77
USP4-205ENST00000431357 CCR4P51679 360 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 EGR4Q05215 589 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 HYAL1Q12794 435 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 HTR4Q13639 388 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 TOMM20Q15388 145 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 CD226Q15762 336 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 MESTQ5EB52 335 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 C3P1Q6ZMU1 363 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 CDH26Q8IXH8 852 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 OR6N2Q8NGY6 317 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 ASB13Q8WXK3 278 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 SLC46A1Q96NT5 459 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 TSPAN32Q96QS1 320 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 PBX4Q9BYU1 374 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 LAT2Q9GZY6 243 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 SLC6A15Q9H2J7 730 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 PPIEQ9UNP9 301 aaKnown RBP10.25□□□□□ -0.77
USP4-205ENST00000431357 PLCL2Q9UPR0 1127 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 HMSDA8MTL9 139 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 H0YIG0 161 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 RGS11O94810 467 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 UTS2O95399 124 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 MAS1P04201 325 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 F13BP05160 661 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 IGHV4-34P06331 123 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 GABRG2P18507 467 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 RPS15P62841 145 aaKnown RBP10.24□□□□□ -0.77
USP4-205ENST00000431357 TFF2Q03403 129 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 SRSF5Q13243 272 aaKnown RBP10.24□□□□□ -0.77
USP4-205ENST00000431357 FZD2Q14332 565 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 ZNF542PQ5EBM4 170 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 NHLRC3Q5JS37 347 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 TMEM31Q5JXX7 168 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 STPG1Q5TH74 334 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 KIAA0895LQ68EN5 471 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 GATSQ8NAP1 163 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 ZSCAN1Q8NBB4 408 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 ZNF563Q8TA94 476 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 ASB17Q8WXJ9 295 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 MCHR2Q969V1 340 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 TMEM106AQ96A25 262 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 MMABQ96EY8 250 aaPredicted RBP10.24□□□□□ -0.77
USP4-205ENST00000431357 ELMOD3Q96FG2 381 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 C4orf45Q96LM5 186 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 SFXN2Q96NB2 322 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 ADAM19Q9H013 955 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 C8orf33Q9H7E9 229 aaPredicted RBP10.24□□□□□ -0.77
USP4-205ENST00000431357 GPR27Q9NS67 375 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 MED9Q9NWA0 146 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 GGT3PA6NGU5 568 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 TVP23AA6NH52 213 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 C4orf47A7E2U8 309 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 C17orf105B2RV13 164 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 MCRIP1C9JLW8 97 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 OIP5O43482 229 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 AKR7A3O95154 331 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 THEGLP0DJG4 465 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 CXCL2P19875 107 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 SDHBP21912 280 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 PCGF3Q3KNV8 242 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 SLC36A1Q7Z2H8 476 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 DPY19L4Q7Z388 723 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 PRSS42Q7Z5A4 293 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 KRT77Q7Z794 578 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 RBPMSQ93062 196 aaKnown RBP10.24□□□□□ -0.77
USP4-205ENST00000431357 PNPLA2Q96AD5 504 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 SGK3Q96BR1 496 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 S1PR5Q9H228 398 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 CA10Q9NS85 328 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 GLS2Q9UI32 602 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 ZNF346Q9UL40 294 aaKnown RBP10.24□□□□□ -0.77
USP4-205ENST00000431357 PIAS3Q9Y6X2 628 aa10.24□□□□□ -0.77
USP4-205ENST00000431357 TRAV8-7A0A075B6U6 113 aa10.23□□□□□ -0.77
USP4-205ENST00000431357 FRG2CA6NGY1 282 aa10.23□□□□□ -0.77
USP4-205ENST00000431357 ZNF98A6NK75 572 aa10.23□□□□□ -0.77
USP4-205ENST00000431357 PYCARD-AS1I3L0S3 204 aa10.23□□□□□ -0.77
USP4-205ENST00000431357 DCTN6O00399 190 aa10.23□□□□□ -0.77
USP4-205ENST00000431357 CDC40O60508 579 aaKnown RBP eCLIP10.23□□□□□ -0.77
USP4-205ENST00000431357 AKAIN1P0CW23 69 aa10.23□□□□□ -0.77
USP4-205ENST00000431357 TACR3P29371 465 aa10.23□□□□□ -0.77
USP4-205ENST00000431357 CSF2RBP32927 897 aa10.23□□□□□ -0.77
USP4-205ENST00000431357 RORAP35398 523 aa10.23□□□□□ -0.77
USP4-205ENST00000431357 C1orf61Q13536 156 aa10.23□□□□□ -0.77
USP4-205ENST00000431357 MPPED2Q15777 294 aa10.23□□□□□ -0.77
USP4-205ENST00000431357 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.23□□□□□ -0.77
USP4-205ENST00000431357 B3GNTL1Q67FW5 361 aaPredicted RBP10.23□□□□□ -0.77
USP4-205ENST00000431357 CBLN3Q6UW01 205 aa10.23□□□□□ -0.77
USP4-205ENST00000431357 OR6N1Q8NGY5 312 aa10.23□□□□□ -0.77
USP4-205ENST00000431357 OTOSQ8NHW6 89 aa10.23□□□□□ -0.77
USP4-205ENST00000431357 MRPL38Q96DV4 380 aaKnown RBP10.23□□□□□ -0.77
USP4-205ENST00000431357 KTI12Q96EK9 354 aaPredicted RBP10.23□□□□□ -0.77
USP4-205ENST00000431357 CCDC120Q96HB5 630 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms