RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ZNF57Q68EA5 555 aaPredicted RBP12.55□□□□□ -0.4
HOXC4-202ENST00000430889 ARSKQ6UWY0 536 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 NHLRC1Q6VVB1 395 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 STAC2Q6ZMT1 411 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 NCCRP1Q6ZVX7 275 aaPredicted RBP12.55□□□□□ -0.4
HOXC4-202ENST00000430889 PPP1R3BQ86XI6 285 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 WDFY1Q8IWB7 410 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 CMTM4Q8IZR5 234 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 EID2Q8N6I1 236 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 BMPERQ8N8U9 685 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 THAP3Q8WTV1 239 aaPredicted RBP12.55□□□□□ -0.4
HOXC4-202ENST00000430889 EDAQ92838 391 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 CREB3L1Q96BA8 519 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 ARL5BQ96KC2 179 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 FAM210AQ96ND0 272 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 DCBLD2Q96PD2 775 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 HDHD2Q9H0R4 259 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 GAREM1Q9H706 876 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 RABL2AQ9UBK7 228 aaPredicted RBP12.55□□□□□ -0.4
HOXC4-202ENST00000430889 NUFIP1Q9UHK0 495 aaKnown RBP12.55□□□□□ -0.4
HOXC4-202ENST00000430889 RABL2BQ9UNT1 228 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 ALG5Q9Y673 324 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 VCANP13611 3396 aa12.55□□□□□ -0.4
HOXC4-202ENST00000430889 ARPC4-TTLL3A0A0A6YYG9 625 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 C2orf72A6NCS6 295 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 EFNA2O43921 213 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 ZNF432O94892 652 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 RAF1P04049 648 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 FBXO45P0C2W1 286 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 HLA-DOBP13765 273 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 MAPK3P27361 379 aaPredicted RBP12.54□□□□□ -0.4
HOXC4-202ENST00000430889 CCR9P51686 369 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 DGCR2P98153 550 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 FOXF1Q12946 379 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 SLC17A1Q14916 467 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 MFSD13AQ14CX5 517 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 ETFDHQ16134 617 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 TEX30Q5JUR7 227 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 STPG1Q5TH74 334 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 BICRALQ6AI39 1079 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 OR5M10Q6IEU7 315 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 LRRC69Q6ZNQ3 347 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 ESPNLQ6ZVH7 1005 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 BPHLQ86WA6 291 aaPredicted RBP12.54□□□□□ -0.4
HOXC4-202ENST00000430889 OR5L2Q8NGL0 311 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 IFI44Q8TCB0 444 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 ASB10Q8WXI3 467 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 ASB17Q8WXJ9 295 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 PIGKQ92643 395 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 MCHR2Q969V1 340 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 AKIRIN1Q9H9L7 192 aaPredicted RBP12.54□□□□□ -0.4
HOXC4-202ENST00000430889 MED11Q9P086 117 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 MYOTQ9UBF9 498 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 ING1Q9UK53 422 aaPredicted RBP12.54□□□□□ -0.4
HOXC4-202ENST00000430889 CACNG2Q9Y698 323 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 V9GY05 133 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 LOC102723996A0A087X1L8 192 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 MEN1O00255 615 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 ZNF593O00488 134 aaPredicted RBP12.54□□□□□ -0.4
HOXC4-202ENST00000430889 SLC16A7O60669 478 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 ZFAND5O76080 213 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 MSX1P28360 303 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 INPP1P49441 399 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 PITPNAQ00169 270 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 PUDPQ08623 228 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 RASGEF1BQ0VAM2 473 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 PCK2Q16822 640 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 PLPPR5Q32ZL2 321 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 WDR38Q5JTN6 314 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 OR10AC1Q8NH08 325 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 POC1BQ8TC44 478 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 RNF128Q8TEB7 428 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 SMIM4Q8WVI0 70 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 ATOH1Q92858 354 aaPredicted RBP12.54□□□□□ -0.4
HOXC4-202ENST00000430889 CRB3Q9BUF7 120 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 MRI1Q9BV20 369 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 POTEKPQ9BYX7 375 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 ABCG5Q9H222 651 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 WDR54Q9H977 334 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 PLEKHA1Q9HB21 404 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 KLHL13Q9P2N7 655 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 OR5V1Q9UGF6 321 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 IKZF2Q9UKS7 526 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 MYO15AQ9UKN7 3530 aa12.54□□□□□ -0.4
HOXC4-202ENST00000430889 EML6Q6ZMW3 1958 aa12.53□□□□□ -0.4
HOXC4-202ENST00000430889 A8MV72 311 aaPredicted RBP12.53□□□□□ -0.4
HOXC4-202ENST00000430889 AGRPO00253 132 aa12.53□□□□□ -0.4
HOXC4-202ENST00000430889 RGS13O14921 159 aa12.53□□□□□ -0.4
HOXC4-202ENST00000430889 SRSF10O75494 262 aaKnown RBP12.53□□□□□ -0.4
HOXC4-202ENST00000430889 WNT11O96014 354 aa12.53□□□□□ -0.4
HOXC4-202ENST00000430889 CALCBP10092 127 aa12.53□□□□□ -0.4
HOXC4-202ENST00000430889 MNDAP41218 407 aa12.53□□□□□ -0.4
HOXC4-202ENST00000430889 MAP2K6P52564 334 aa12.53□□□□□ -0.4
HOXC4-202ENST00000430889 KLF9Q13886 244 aaPredicted RBP12.53□□□□□ -0.4
HOXC4-202ENST00000430889 IL11RAQ14626 422 aa12.53□□□□□ -0.4
HOXC4-202ENST00000430889 MELKQ14680 651 aa12.53□□□□□ -0.4
HOXC4-202ENST00000430889 PCOLCEQ15113 449 aa12.53□□□□□ -0.4
HOXC4-202ENST00000430889 BCL2A1Q16548 175 aa12.53□□□□□ -0.4
HOXC4-202ENST00000430889 NTRK2Q16620 822 aa12.53□□□□□ -0.4
HOXC4-202ENST00000430889 HES5Q5TA89 166 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms