RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 SLC7A6Q92536 515 aa15.27■□□□□ 0.04
RIF1-204ENST00000430328 ADGRG7Q96K78 797 aa15.27■□□□□ 0.04
RIF1-204ENST00000430328 WDR61Q9GZS3 305 aaKnown RBP15.27■□□□□ 0.04
RIF1-204ENST00000430328 DEGS1O15121 323 aa15.27■□□□□ 0.04
RIF1-204ENST00000430328 EFSO43281 561 aa15.27■□□□□ 0.04
RIF1-204ENST00000430328 FABP4P15090 132 aa15.27■□□□□ 0.04
RIF1-204ENST00000430328 SH3BP2P78314 561 aa15.27■□□□□ 0.04
RIF1-204ENST00000430328 KHSRPQ92945 711 aaKnown RBP eCLIP15.27■□□□□ 0.042e-7■■■■□ 19.9
RIF1-204ENST00000430328 LHX4Q969G2 390 aa15.27■□□□□ 0.04
RIF1-204ENST00000430328 TSACCQ96A04 125 aaPredicted RBP15.27■□□□□ 0.04
RIF1-204ENST00000430328 L3HYPDHQ96EM0 354 aa15.27■□□□□ 0.04
RIF1-204ENST00000430328 C1orf74Q96LT6 269 aa15.27■□□□□ 0.04
RIF1-204ENST00000430328 CDKN2DP55273 166 aa15.27■□□□□ 0.03
RIF1-204ENST00000430328 DOC2BQ14184 412 aa15.27■□□□□ 0.03
RIF1-204ENST00000430328 KDM4DQ6B0I6 523 aa15.27■□□□□ 0.03
RIF1-204ENST00000430328 BOKQ9UMX3 212 aaPredicted RBP15.27■□□□□ 0.03
RIF1-204ENST00000430328 SCML1Q9UN30 329 aa15.27■□□□□ 0.03
RIF1-204ENST00000430328 ZNF443Q9Y2A4 671 aaPredicted RBP15.27■□□□□ 0.03
RIF1-204ENST00000430328 TIMM9Q9Y5J7 89 aa15.27■□□□□ 0.03
RIF1-204ENST00000430328 POU3F1Q03052 451 aaPredicted RBP15.27■□□□□ 0.03
RIF1-204ENST00000430328 ZNF787Q6DD87 383 aa15.27■□□□□ 0.03
RIF1-204ENST00000430328 EMC9Q9Y3B6 208 aa15.27■□□□□ 0.03
RIF1-204ENST00000430328 OPRD1P41143 372 aa15.27■□□□□ 0.03
RIF1-204ENST00000430328 BCL6P41182 706 aa15.27■□□□□ 0.03
RIF1-204ENST00000430328 IGDCC3Q8IVU1 814 aa15.27■□□□□ 0.03
RIF1-204ENST00000430328 RANBP9Q96S59 729 aa15.27■□□□□ 0.03
RIF1-204ENST00000430328 VRTNQ9H8Y1 702 aa15.27■□□□□ 0.03
RIF1-204ENST00000430328 SIAEQ9HAT2 523 aa15.27■□□□□ 0.03
RIF1-204ENST00000430328 OBP2AQ9NY56 170 aa15.27■□□□□ 0.03
RIF1-204ENST00000430328 C5AR2Q9P296 337 aa15.27■□□□□ 0.03
RIF1-204ENST00000430328 A6NL46 340 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 SLC6A12P48065 614 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 ELAVL3Q14576 367 aaKnown RBP15.26■□□□□ 0.03
RIF1-204ENST00000430328 LY6G5CQ5SRR4 150 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 CLDN22Q8N7P3 220 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 OR10X1Q8NGY0 326 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 APIPQ96GX9 242 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 GORASP2Q9H8Y8 452 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 AGPAT4Q9NRZ5 378 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 ACOD1A6NK06 481 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 FAM110CQ1W6H9 321 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 IL17FQ96PD4 163 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 MRIQ9BWK5 157 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 LAMP3Q9UQV4 416 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 NRXN1Q9ULB1 1477 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 TRAV34A0A0B4J273 112 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 IGLON5A6NGN9 336 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 RNGTTO60942 597 aaKnown RBP15.26■□□□□ 0.03
RIF1-204ENST00000430328 CLDN12P56749 244 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 OR4D1Q15615 310 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 TSEN54Q7Z6J9 526 aaKnown RBP15.26■□□□□ 0.03
RIF1-204ENST00000430328 GRAMD2AQ8IUY3 354 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 OR2AE1Q8NHA4 323 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 CMBLQ96DG6 245 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 TP53RKQ96S44 253 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 GPR171O14626 319 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 SLC25A6P12236 298 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 FKBP1BP68106 108 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 EIF4E3Q8N5X7 224 aaKnown RBP15.26■□□□□ 0.03
RIF1-204ENST00000430328 OR10P1Q8NGE3 313 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 OR4A4PQ8NGN8 299 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 OR1J1Q8NGS3 322 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 FAM166BA8MTA8 275 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 AQP9O43315 295 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 GPR32O75388 356 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 GPM6AP51674 278 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 Q3ZCU0 254 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 CDCA2Q69YH5 1023 aaPredicted RBP15.26■□□□□ 0.03
RIF1-204ENST00000430328 TXNRD3NBQ6F5E7 133 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 ADGRE4PQ86SQ3 457 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 OR2T6Q8NHC8 308 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 C11orf49Q9H6J7 331 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 FAM198AQ9UFP1 575 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 NXT1Q9UKK6 140 aaKnown RBP15.26■□□□□ 0.03
RIF1-204ENST00000430328 ZNF835Q9Y2P0 537 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 TMEM88BA6NKF7 163 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 OR1Q1Q15612 314 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 GGNBP1Q5YKI7 109 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 TMEM135Q86UB9 458 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 DYNC2LI1Q8TCX1 351 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 EMG1Q92979 244 aaKnown RBP15.26■□□□□ 0.03
RIF1-204ENST00000430328 TMEM106AQ96A25 262 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 TMEM221A6NGB7 291 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 VNN1O95497 513 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 B2MP61769 119 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 FDX2Q6P4F2 183 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 ETV3LQ6ZN32 361 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 ZBTB44Q8NCP5 570 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 FRMPD1Q5SYB0 1578 aa15.26■□□□□ 0.03
RIF1-204ENST00000430328 K7ERU9 68 aa15.25■□□□□ 0.03
RIF1-204ENST00000430328 M0QYG6 137 aa15.25■□□□□ 0.03
RIF1-204ENST00000430328 LEFTY2O00292 366 aa15.25■□□□□ 0.03
RIF1-204ENST00000430328 BMI1P35226 326 aa15.25■□□□□ 0.03
RIF1-204ENST00000430328 PAX5Q02548 391 aa15.25■□□□□ 0.03
RIF1-204ENST00000430328 PODNL1Q6PEZ8 512 aa15.25■□□□□ 0.03
RIF1-204ENST00000430328 SCGB1D4Q6XE38 83 aa15.25■□□□□ 0.03
RIF1-204ENST00000430328 REC114Q7Z4M0 266 aa15.25■□□□□ 0.03
RIF1-204ENST00000430328 CLRN3Q8NCR9 226 aa15.25■□□□□ 0.03
RIF1-204ENST00000430328 UCN3Q969E3 161 aa15.25■□□□□ 0.03
RIF1-204ENST00000430328 GSTO2Q9H4Y5 243 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms