RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 SNX18Q96RF0 628 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 MRPL13Q9BYD1 178 aaKnown RBP10.12□□□□□ -0.79
HDAC4-202ENST00000430200 OR51B6Q9H340 312 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 DYNLRB1Q9NP97 96 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 NANSQ9NR45 359 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 MAN2C1Q9NTJ4 1040 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 TMEM160Q9NX00 188 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 ARMCX1Q9P291 453 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 CDC42EP3Q9UKI2 254 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 TRIM33Q9UPN9 1127 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 POFUT2Q9Y2G5 429 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 SNX13Q9Y5W8 968 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 LOC100289279A0A1B0GTE1 492 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 DHHO43323 396 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 LMX1BO60663 402 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 OR7A10O76100 309 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 CLPTM1O96005 669 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 MMP7P09237 267 aaPredicted RBP10.11□□□□□ -0.79
HDAC4-202ENST00000430200 TACSTD2P09758 323 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 FAM157BP0CG42 384 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 BMP4P12644 408 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 RBMXP38159 391 aaKnown RBP10.11□□□□□ -0.79
HDAC4-202ENST00000430200 AQP2P41181 271 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 FHL1Q13642 323 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 CCNIQ14094 377 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 ALKBH6Q3KRA9 238 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 LRRC23Q53EV4 343 aaPredicted RBP10.11□□□□□ -0.79
HDAC4-202ENST00000430200 FAM120AOSQ5T036 256 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 ARMC4Q5T2S8 1044 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 TTC33Q6PID6 262 aaPredicted RBP10.11□□□□□ -0.79
HDAC4-202ENST00000430200 SYT14Q8NB59 555 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 OR4K5Q8NGD3 323 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 SPATA3Q8NHX4 192 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 C10orf82Q8WW14 230 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 ZNF566Q969W8 418 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 NABP1Q96AH0 204 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 RCN3Q96D15 328 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 SLC25A44Q96H78 314 aaPredicted RBP10.11□□□□□ -0.79
HDAC4-202ENST00000430200 MPP4Q96JB8 637 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 SIKE1Q9BRV8 207 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 SLC19A3Q9BZV2 496 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 EVA1AQ9H8M9 152 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 B3GAT2Q9NPZ5 323 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 CMTM6Q9NX76 183 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 A4GNTQ9UNA3 340 aa10.11□□□□□ -0.79
HDAC4-202ENST00000430200 ZNF726A6NNF4 738 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 FAM220BPB1ANY3 271 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 BLOC1S5-TXNDC5H3BN57 136 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 J3KTA2 159 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 TRMUO75648 421 aaKnown RBP10.1□□□□□ -0.79
HDAC4-202ENST00000430200 RP2O75695 350 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 UBL3O95164 117 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 RAB36O95755 333 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 MT-ND1P03886 318 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 QDPRP09417 244 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 UMPSP11172 480 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 NAT2P11245 290 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 CDAP32320 146 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 GZMKP49863 264 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 ZNF133P52736 654 aaPredicted RBP10.1□□□□□ -0.79
HDAC4-202ENST00000430200 GUCY1A3Q02108 690 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 CYBRD1Q53TN4 286 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 COQ5Q5HYK3 327 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 INTS11Q5TA45 600 aaKnown RBP10.1□□□□□ -0.79
HDAC4-202ENST00000430200 METTL21CQ5VZV1 264 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 FAM166AQ6J272 317 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 PODNL1Q6PEZ8 512 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 TSEN54Q7Z6J9 526 aaKnown RBP10.1□□□□□ -0.79
HDAC4-202ENST00000430200 VTCN1Q7Z7D3 282 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 IGFN1Q86VF2 1251 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 SLC30A8Q8IWU4 369 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 CCDC36Q8IYA8 594 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 ZNF786Q8N393 782 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 RBM15BQ8NDT2 890 aaKnown RBP10.1□□□□□ -0.79
HDAC4-202ENST00000430200 HDAC2Q92769 488 aaKnown RBP10.1□□□□□ -0.79
HDAC4-202ENST00000430200 MCHR2Q969V1 340 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 REPIN1Q9BWE0 567 aaKnown RBP10.1□□□□□ -0.79
HDAC4-202ENST00000430200 NARFLQ9H6Q4 476 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 MOV10Q9HCE1 1003 aaKnown RBP10.1□□□□□ -0.79
HDAC4-202ENST00000430200 MYOZ1Q9NP98 299 aaPredicted RBP10.1□□□□□ -0.79
HDAC4-202ENST00000430200 RIMS3Q9UJD0 308 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 CMAHPQ9Y471 501 aa10.1□□□□□ -0.79
HDAC4-202ENST00000430200 LOC100653049A0A140TA62 436 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 M0R233 179 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 NME4O00746 187 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 FFAR1O14842 300 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 SYNGR3O43761 229 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 MGRN1O60291 552 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 KRT34O76011 436 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 PRSS23O95084 383 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 OR5F1O95221 314 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 OR6A2O95222 327 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 SERPINA5P05154 406 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 ZNF26P17031 533 aaPredicted RBP10.09□□□□□ -0.79
HDAC4-202ENST00000430200 MAKP20794 623 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 PAX7P23759 505 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 APEX1P27695 318 aaKnown RBP10.09□□□□□ -0.79
HDAC4-202ENST00000430200 GLRXP35754 106 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 MAGEB1P43366 347 aa10.09□□□□□ -0.79
HDAC4-202ENST00000430200 ARFIP2P53365 341 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms