RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 SMIM31A0A1B0GVY4 71 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 E9PBE3 544 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 NPIPB9F8W1W9 429 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 WRBO00258 174 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 NDUFA2O43678 99 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 TRIM3O75382 744 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 POP7O75817 140 aaKnown RBP3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 RBBP9O75884 186 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 TSPAN12O95859 305 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 HPP00738 406 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 OPN1LWP04000 364 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 ATP1B1P05026 303 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 OCM2P0CE71 109 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 OCMP0CE72 109 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 PRPS2P11908 318 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 FOLR2P14207 255 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 ABOP16442 354 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 GALP22466 123 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 RRM2P31350 389 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 SLCO1A2P46721 670 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 BCAP31P51572 246 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 SLC7A2P52569 658 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 PSMD4P55036 377 aaKnown RBP3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 DHODHQ02127 395 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 CACNG1Q06432 222 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 CEBPEQ15744 281 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 NPTX1Q15818 432 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 RBBP7Q16576 425 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 ZNF674Q2M3X9 581 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 C1orf189Q5VU69 101 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 C3orf33Q6P1S2 294 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 DNAJC24Q6P3W2 148 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 ZNF841Q6ZN19 808 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 CDHR3Q6ZTQ4 885 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 PRUNE1Q86TP1 453 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 SLC25A42Q86VD7 318 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 TPRA1Q86W33 373 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 ZNF547Q8IVP9 402 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 FAM89BQ8N5H3 189 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 ATPAF2Q8N5M1 289 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 TEX26Q8N6G2 289 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 MLKLQ8NB16 471 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 MINDY2Q8NBR6 621 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 OR4E2Q8NGC2 313 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 OR9A1PQ8NGU1 263 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 DTX3LQ8TDB6 740 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 AGAP11Q8TF27 550 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 NAT14Q8WUY8 206 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 MYDGFQ969H8 173 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 MOB3AQ96BX8 217 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 C12orf66Q96MD2 445 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 GPR137Q96N19 417 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 FAM111AQ96PZ2 611 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 RAB3IPQ96QF0 476 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 C11orf70Q9BRQ4 267 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 TUBGCP2Q9BSJ2 902 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 CCM2Q9BSQ5 444 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 TMEM121Q9BTD3 319 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 NTMT1Q9BV86 223 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 TXLNGYQ9BZA5 131 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 PRRG4Q9BZD6 226 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 PARLQ9H300 379 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 KIR3DX1Q9H7L2 352 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 PLGRKTQ9HBL7 147 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 NT5MQ9NPB1 228 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 KCNJ16Q9NPI9 418 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 IMP3Q9NV31 184 aaKnown RBP3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 NSMCE4AQ9NXX6 385 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 ACTR3BQ9P1U1 418 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 IL19Q9UHD0 177 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 TRMT6Q9UJA5 497 aaKnown RBP3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 POMT2Q9UKY4 750 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 SELENOKQ9Y6D0 94 aa3.79□□□□□ -1.8
HMGB3P5-201ENST00000428894 SCN2AQ99250 2005 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 IGHV4-30-2A0A087WSY4 118 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 NSG1A0A0A6YYJ2 146 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 TRBV4-1A0A0J9YWV2 114 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 SH3PXD2BA1X283 911 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 FUOMA2VDF0 154 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 MGAT4DA6NG13 374 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 TMEM210A6NLX4 147 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 DNALI1O14645 258 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 CLOCKO15516 846 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 SEMA3DO95025 777 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 SNAPINO95295 136 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 PGM3O95394 542 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 APOC1P02654 83 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 SLC35G4P0C7Q5 338 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 UCHL3P15374 230 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 CXCR2P25025 360 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 PCGF2P35227 344 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 NSG1P42857 185 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 ZFP36L2P47974 494 aaKnown RBP3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 RAB28P51157 221 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 PRRX1P54821 245 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 AP1S2P56377 157 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 GLO1Q04760 184 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 STX5Q13190 355 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 NAB1Q13506 487 aa3.78□□□□□ -1.8
HMGB3P5-201ENST00000428894 LRRC36Q1X8D7 754 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms