RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 OR4F15Q8NGB8 312 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZMYND19Q96E35 227 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 WDYHV1Q96HA8 205 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 PSD2Q9BQI7 771 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 CALHM2Q9HA72 323 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 FKBP14Q9NWM8 211 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 FASNP49327 2511 aaKnown RBP8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 ARRDC5A6NEK1 342 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 H3BSH0 61 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 HCN1O60741 890 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 OR6A2O95222 327 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 TPOP07202 933 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZNF708P17019 499 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 PSMB9P28065 219 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 ACVR1BP36896 505 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 IFNGR2P38484 337 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 NAA10P41227 235 aaPredicted RBP8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 HTR3AP46098 478 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 CENPAP49450 140 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 PCYT1AP49585 367 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 CLDN17P56750 224 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 TSC22D1Q15714 1073 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 SLX4IPQ5VYV7 408 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 C12orf73Q69YU5 71 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 CASP12Q6UXS9 341 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 SPATC1Q76KD6 591 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZIC4Q8N9L1 334 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZBTB8BQ8NAP8 495 aaPredicted RBP8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 SLC37A3Q8NCC5 494 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 OR52L1Q8NGH7 329 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 ALKBH3Q96Q83 286 aaPredicted RBP8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 TRIB1Q96RU8 372 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 NUAK2Q9H093 628 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 CHST11Q9NPF2 352 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 NRIP3Q9NQ35 241 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZNF229Q9UJW7 825 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 ARHGAP21Q5T5U3 1957 aa8.47□□□□□ -1.05
HMGCLL1-206ENST00000428842 PNMA8CA0A1B0GUJ8 204 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 ACOT7O00154 380 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZNF208O43345 1280 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 DOK2O60496 412 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 WNT11O96014 354 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 SCG5P05408 212 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 BMP4P12644 408 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 CTLA4P16410 223 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 RPS7P62081 194 aaKnown RBP8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 NCS1P62166 190 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 SIRPAP78324 504 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 H3F3AP84243 136 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 IFITM3Q01628 133 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 TEKQ02763 1124 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 SNTB1Q13884 538 aaKnown RBP8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZSWIM7Q19AV6 140 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 CD300LDQ6UXZ3 194 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 SLC35D2Q76EJ3 337 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 OR6V1Q8N148 313 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 OR6K6Q8NGW6 343 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 MFSD8Q8NHS3 518 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 RHOXF1Q8NHV9 184 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 FCGR1BQ92637 280 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 ITPKCQ96DU7 683 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 ASPNQ9BXN1 380 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 SLIRPQ9GZT3 109 aaKnown RBP8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 FKRPQ9H9S5 495 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 GRHPRQ9UBQ7 328 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 CLEC2DQ9UHP7 191 aa8.46□□□□□ -1.05
HMGCLL1-206ENST00000428842 PKDREJQ9NTG1 2253 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 CLCA1A8K7I4 914 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 TRAF3IP2O43734 574 aaPredicted RBP8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 PATE4P0C8F1 98 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 UGT2B10P36537 528 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 SMSP52788 366 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 LSM3P62310 102 aaKnown RBP8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 COX10Q12887 443 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 MRPL49Q13405 166 aaKnown RBP8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 ZNF239Q16600 458 aaKnown RBP8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 TRIM16LQ309B1 348 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 LINGO2Q7L985 606 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 CD163Q86VB7 1156 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 LNX2Q8N448 690 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 KDF1Q8NAX2 398 aaPredicted RBP8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 NAXEQ8NCW5 288 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 NPEPL1Q8NDH3 523 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 OR2V1Q8NHB1 315 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 STK35Q8TDR2 534 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 TM9SF4Q92544 642 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 LGALS12Q96DT0 336 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 ZNF582Q96NG8 517 aaPredicted RBP8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 DACH2Q96NX9 599 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 SLC19A3Q9BZV2 496 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 POLR2J2Q9GZM3 115 aaKnown RBP8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 WDR76Q9H967 626 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 INIPQ9NRY2 104 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 PSORS1C1Q9UIG5 152 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 DAPK2Q9UIK4 370 aa8.46□□□□□ -1.06
HMGCLL1-206ENST00000428842 A0A087WZY1 265 aa8.45□□□□□ -1.06
HMGCLL1-206ENST00000428842 SELENOFO60613 162 aa8.45□□□□□ -1.06
HMGCLL1-206ENST00000428842 RCBTB2O95199 551 aa8.45□□□□□ -1.06
HMGCLL1-206ENST00000428842 LCKP06239 509 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms