RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 PTCHD4Q6ZW05 846 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 ABHD12BQ7Z5M8 362 aaPredicted RBP14.97□□□□□ -0.01
COL7A1-202ENST00000422991 CXorf67Q86X51 503 aaPredicted RBP14.97□□□□□ -0.01
COL7A1-202ENST00000422991 ULBP2Q9BZM5 246 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 GPR35Q9HC97 309 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 B3GAT2Q9NPZ5 323 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 ORC6Q9Y5N6 252 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 PRSS37A4D1T9 235 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 ARHGEF9O43307 516 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 AHCYL1O43865 530 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 HIST1H1CP16403 213 aaKnown RBP14.96□□□□□ -0.01
COL7A1-202ENST00000422991 GRNP28799 593 aaKnown RBP14.96□□□□□ -0.01
COL7A1-202ENST00000422991 EPHA2P29317 976 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 MPGP29372 298 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 NOS3P29474 1203 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 CCKARP32238 428 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 GIPRP48546 466 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 ZNF133P52736 654 aaPredicted RBP14.96□□□□□ -0.01
COL7A1-202ENST00000422991 CDK5Q00535 292 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 MYBPC1Q00872 1141 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 ROR2Q01974 943 aaKnown RBP14.96□□□□□ -0.01
COL7A1-202ENST00000422991 CD47Q08722 323 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 GINS1Q14691 196 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 SLC35F1Q5T1Q4 408 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 LRFN4Q6PJG9 635 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 STAC2Q6ZMT1 411 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 LRRC46Q96FV0 321 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 SNX18Q96RF0 628 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 CRLF2Q9HC73 371 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 NPDC1Q9NQX5 325 aaPredicted RBP14.96□□□□□ -0.01
COL7A1-202ENST00000422991 TAS2R16Q9NYV7 291 aa14.96□□□□□ -0.01
COL7A1-202ENST00000422991 VSX1Q9NZR4 365 aaPredicted RBP14.96□□□□□ -0.01
COL7A1-202ENST00000422991 KLF2Q9Y5W3 355 aaPredicted RBP14.96□□□□□ -0.01
COL7A1-202ENST00000422991 MAST4O15021 2626 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 SLC22A23A1A5C7 686 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 A1L4Q6 167 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 ATP6V1G2O95670 118 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 NR2C1P13056 603 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 CDH2P19022 906 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-202ENST00000422991 PSMB1P20618 241 aaKnown RBP14.95□□□□□ -0.02
COL7A1-202ENST00000422991 CDKN2AP42771 156 aaKnown RBP14.95□□□□□ -0.02
COL7A1-202ENST00000422991 RAD23AP54725 363 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 FMODQ06828 376 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 FAM27E3Q08E93 113 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 NPRL3Q12980 569 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 ITGADQ13349 1161 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 PTGES3Q15185 160 aaKnown RBP14.95□□□□□ -0.02
COL7A1-202ENST00000422991 STK11Q15831 433 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 LRRC36Q1X8D7 754 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 CEACAM16Q2WEN9 425 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 C10orf128Q5T292 105 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 SFRP5Q5T4F7 317 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 TMEM236Q5W0B7 351 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 ACSM5Q6NUN0 579 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 JAZF1Q86VZ6 243 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 PACRGLQ8N7B6 248 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 ZNF433Q8N7K0 673 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-202ENST00000422991 SDR9C7Q8NEX9 313 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 OR4K13Q8NH42 304 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 FNDC8Q8TC99 324 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 MCHR2Q969V1 340 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 ZNF837Q96EG3 531 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-202ENST00000422991 RIBC2Q9H4K1 309 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 C8orf4Q9NR00 106 aa14.95□□□□□ -0.02
COL7A1-202ENST00000422991 ZAR1LA6NP61 321 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 CYSRT1A8MQ03 144 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 LYZL6O75951 148 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 QDPRP09417 244 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 UGT2B10P36537 528 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 SH3BGRP55822 239 aaPredicted RBP14.94□□□□□ -0.02
COL7A1-202ENST00000422991 SORDQ00796 357 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL7A1-202ENST00000422991 ZNF362Q5T0B9 420 aaPredicted RBP14.94□□□□□ -0.02
COL7A1-202ENST00000422991 THEM4Q5T1C6 240 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 C9orf135Q5VTT2 229 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 LEG1Q6P5S2 330 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 NPEPL1Q8NDH3 523 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 KISS1RQ969F8 398 aaPredicted RBP14.94□□□□□ -0.02
COL7A1-202ENST00000422991 MBOAT4Q96T53 435 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 NMNAT3Q96T66 252 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 SYT4Q9H2B2 425 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 CMC2Q9NRP2 79 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 KLHL21Q9UJP4 597 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 GPR52Q9Y2T5 361 aa14.94□□□□□ -0.02
COL7A1-202ENST00000422991 IGKV1D-43A0A0B4J1Z2 117 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 RIIAD1A6NNX1 92 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 C16orf97H3BN30 126 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 C19orf84I3L1E1 186 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 DHHO43323 396 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 SLC2A10O95528 541 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 CLDN1O95832 211 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 IFNGP01579 166 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 POLR2IP36954 125 aaKnown RBP14.93□□□□□ -0.02
COL7A1-202ENST00000422991 TSC22D1Q15714 1073 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 SLX4IPQ5VYV7 408 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 SLC25A47Q6Q0C1 308 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 BHLHA15Q7RTS1 189 aaPredicted RBP14.93□□□□□ -0.02
COL7A1-202ENST00000422991 GALNT4Q8N4A0 578 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 SLC37A3Q8NCC5 494 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 C1orf162Q8NEQ5 155 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms