RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ADORA3P0DMS8 318 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 CCL2P13500 99 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 ETS2P15036 469 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 ZNF250P15622 560 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 RGS8P57771 180 aaPredicted RBP8.54□□□□□ -1.04
MDC1-202ENST00000416571 ERVS71-1P61550 626 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 GLO1Q04760 184 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 SLC3A1Q07837 685 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 FADDQ13158 208 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 RGNQ15493 299 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 TSTQ16762 297 aaKnown RBP8.54□□□□□ -1.04
MDC1-202ENST00000416571 KRT71Q3SY84 523 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 SLC36A2Q495M3 483 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 ARMCX4Q5H9R4 360 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 CEP85LQ5SZL2 805 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 MSANTD1Q6ZTZ1 278 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 DPPA2Q7Z7J5 298 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 KRT73Q86Y46 540 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 SIGLECL1Q8N7X8 197 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 CCL17Q92583 94 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 VPS33AQ96AX1 596 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 MOGAT1Q96PD6 335 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 TSPAN32Q96QS1 320 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 GPA33Q99795 319 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 BCL2L14Q9BZR8 327 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 WDR55Q9H6Y2 383 aaPredicted RBP8.54□□□□□ -1.04
MDC1-202ENST00000416571 ZMAT3Q9HA38 289 aaKnown RBP8.54□□□□□ -1.04
MDC1-202ENST00000416571 A4GALTQ9NPC4 353 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 MRPL39Q9NYK5 338 aaKnown RBP8.54□□□□□ -1.04
MDC1-202ENST00000416571 UBAP1Q9NZ09 502 aa8.54□□□□□ -1.04
MDC1-202ENST00000416571 TESQ9UGI8 421 aaKnown RBP8.54□□□□□ -1.04
MDC1-202ENST00000416571 RYR3Q15413 4870 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 PLSCR5A0PG75 271 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 LRRN3E7EW58 273 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 CLIC1O00299 241 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 PLPP3O14495 311 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 HDAC3O15379 428 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 FOXH1O75593 365 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 SNAP29O95721 258 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 MT-ATP6P00846 226 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 ARAFP10398 606 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 KITP10721 976 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 PRTN3P24158 256 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 GCH1P30793 250 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 APLNRP35414 380 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 ZNF81P51508 661 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 POLR2JP52435 117 aaKnown RBP8.53□□□□□ -1.04
MDC1-202ENST00000416571 LCN2P80188 198 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 BST1Q10588 318 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 SLC16A14Q7RTX9 510 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 RANBP3LQ86VV4 465 aaPredicted RBP8.53□□□□□ -1.04
MDC1-202ENST00000416571 WDFY1Q8IWB7 410 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 CPEB3Q8NE35 698 aaKnown RBP8.53□□□□□ -1.04
MDC1-202ENST00000416571 OR5J2Q8NH18 312 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 FGFBP3Q8TAT2 258 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 ZNF566Q969W8 418 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 DUX5Q96PT3 197 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 SH3GL3Q99963 347 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 UNKLQ9H9P5 680 aaKnown RBP8.53□□□□□ -1.04
MDC1-202ENST00000416571 SSU72Q9NP77 194 aaKnown RBP8.53□□□□□ -1.04
MDC1-202ENST00000416571 KCNK9Q9NPC2 374 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 TMEM38BQ9NVV0 291 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 GLTPQ9NZD2 209 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 ZIM2Q9NZV7 527 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 CACNG2Q9Y698 323 aa8.53□□□□□ -1.04
MDC1-202ENST00000416571 A0A0B4J2E0 115 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 A0A1B0GX12 115 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 PRORSD1PA6NEY8 169 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 DNAJC9-AS1A6NH13 148 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 DHHO43323 396 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 RNF13O43567 381 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 SPRY3O43610 288 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 MAKP20794 623 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 CCNOP22674 350 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 ATP4BP51164 291 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 ZNF84P51523 738 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 UCP2P55851 309 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 HSF2Q03933 536 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 BAMBIQ13145 260 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 OR1Q1Q15612 314 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 MIDNQ504T8 468 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 FAM209AQ5JX71 171 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 REEP3Q6NUK4 255 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 DHRS4L2Q6PKH6 230 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 UNQ6126/PRO20091Q6UXV3 157 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 SLC35D2Q76EJ3 337 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 DOK3Q7L591 496 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 PAQR4Q8N4S7 273 aaPredicted RBP8.52□□□□□ -1.05
MDC1-202ENST00000416571 LRRC17Q8N6Y2 441 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 GOLGA6L1Q8N7Z2 621 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 RBM15BQ8NDT2 890 aaKnown RBP8.52□□□□□ -1.05
MDC1-202ENST00000416571 BHLHE22Q8NFJ8 381 aaPredicted RBP8.52□□□□□ -1.05
MDC1-202ENST00000416571 OR4K5Q8NGD3 323 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 OR1J1Q8NGS3 322 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 OR6X1Q8NH79 312 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 NFKBIDQ8NI38 313 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 POP5Q969H6 163 aaKnown RBP8.52□□□□□ -1.05
MDC1-202ENST00000416571 TMEM54Q969K7 222 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 SLC25A44Q96H78 314 aaPredicted RBP8.52□□□□□ -1.05
MDC1-202ENST00000416571 ZNF607Q96SK3 696 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms